WORKSHOP
Intelligent Data Analysis in Medicine and Pharmacology (IDAMAP 99)
Saturday, November 6, 1999: 5:00 p.m. - 10:30 p.m.
A Workshop at the AMIA
1999 Annual Symposium - November 6-10, 1999 - Washington, DC
Yuval Shahar (contact);
Sarabjot Anand; Steen Andreassen; Lars Asker; Riccardo Bellazzi; Werner
Horn; Elpida Keravnou; Cristiana Larizza; Nada Lavrac; Xiaohui Liu; Silvia
Miksch; Christian Popow; Blaz Zupan
Submission: July 26, 1999 |
Notification: September 24, 1999 (sorry delayed) |
Camera-ready: October 11, 1999 |
|
This is the fourth workshop on Intelligent Data Analysis in
Medicine and Pharmacology (IDAMAP). The former IDAMAP Workshops
were held in Budapest
in 1996, in Nagoya
in 1997, and in Brighton
in 1998.
General information
IDAMAP-99 is a Workshop at the AMIA
1999 Annual Symposium - November 6-10, 1999 - Washington, DC prior
to the start of the main AMIA conference.
Gathering in an informal setting, workshop participants will have the
opportunity to meet and discuss selected technical topics in an atmosphere,
which fosters the active exchange of ideas among researchers and practitioners.
To encourage interaction and a broad exchange of ideas, the workshop will
be kept small, preferably under 30 active participants, although registered
AMIA 99 Fall Symposium members are welcome to attend. The workshop is intended
to be a genuinely interactive event and not a mini-conference, thus ample
time will be allotted for general discussion. The workshop will last a
half-day.
Topics
In all human activities, automatic data collection pushes towards the development
of tools able to handle and analyze data in a computer-supported fashion.
In the majority of the application areas, this task cannot be accomplished
without using the available knowledge on the domain or on the data analysis
process. This need becomes essential in biomedical applications, since
medical decision-making needs to be supported by arguments based on basic
medical and pharmacological knowledge.
The topics of the workshop are computational methods for data analysis
able to exploit the available knowledge to narrow the gap between data
gathering and data comprehension, as well as their applications in medicine
and pharmacology. Expert physicians should be included in the preparation
of data for IDA process (e.g., data representation, modeling, cleaning,
selection, and transformation), as well as in the interpretation and exploitation
of results and their (potential) impact on medical practice.
Topics include, but are not limited to:
-
effective data mining techniques: machine learning tools,
clustering, etc.
-
temporal reasoning:
-
applications of IDA in patient monitoring or bio-signal processing,
-
interpretation of time-ordered data (derivation and revision of temporal
trends and other forms of temporal data abstraction),
-
information visualization: visualization of medical data and visualization
of IDA's results,
-
case-based reasoning,
-
construction of decision models to support medical decision
making,
-
discovery of new diseases and new drug compounds,
-
pharmacodynamical modeling,
-
predicting drug activity, etc.
Emphasis will also be given to solving of problems, which result from automated
data collection in modern hospitals, such as analysis of computer-based
patient records (CPR), data warehousing tools, intelligent alarming, effective
and efficient monitoring, etc.
In particular, we will ask the participants to address the following
points:
- what kind of knowledge
they have used and/or extracted;
- why they need to exploit
the available prior knowledge in their problem;
- how they have represented
the available knowledge;
- how they plan to use
/ have used the derived knowledge.
Submission of Papers
The workshop invites submission of long and short papers written in English
to the workshop chair, Yuval Shahar (email: shahar@smi.stanford.edu), preferably
in electronic format (pdf or postscript) no later than July 26, 1999.
The length of long papers is of about 5000 words (10 pages) and length
of short papers is about 1500 words (3 pages).
Authors will be notified of acceptance by September 6, 1999.
Papers will appear as separate workshop notes.
SUBMISSION ADDRESS:
Yuval Shahar
Stanford Medical Informatics
Medical School Office Building x215
251 Campus Drive
Stanford University
Stanford, CA 94305-5479
email: shahar@smi.stanford.edu
Scientific Program
The scientific program of the workshop will consist of presentations of
accepted papers and panel discussions. Papers are invited both on methodological
issues of intelligent data analysis as well as on specific applications
in medicine and pharmacology. Panel discussions will be organized into
two phases: the first one will be devoted to identify clusters of basic
approaches presented to intelligently analyze data, the second one will
deal on discussions initialized by participants.
Program Committee
-
Sarabjot Anand, University of Ulster, Northern Ireland
-
Steen Andreassen, Aalborg University, Denmark
-
Lars Asker, Stockholm University, Sweden
-
Riccardo Bellazzi, University of Pavia, Italy
-
Werner Horn, Austrian Research Institute for AI, Austria
-
Elpida Keravnou, University of Cyprus, Cyprus
-
Cristiana Larizza, University of Pavia, Italy
-
Nada Lavrac, J. Stefan Institute, Slovenia
-
Xiaohui Liu, Birkbeck College, University of London, U.K.
-
Silvia Miksch, Vienna University of Technology, Austria (co-chair)
-
Christian Popow, University of Vienna, Austria
-
Yuval Shahar, Stanford University, CA, USA (chair)
-
Blaz Zupan, J. Stefan Institute, Slovenia
List of Accepted Papers
[1] |
An
Architecture for the Recognition and Classification of Multiple Sclerosis
Lessons in MR Images.
E. Ardizzone, R. Pirrone |
[2] |
Intra-patients
Learning by Combining Clustering and Temporal Abstraction.
R. Bellazi, C. Larizza, S. Montani, M. Stefanelli |
[3] |
Specification
and Detection of Periodic Patterns in Clinical Data
S. Chakravarty, Y. Shahar |
[4] |
Feature
Mining and Predictive Model Construction from Severe Trauma Patient's Data
J. Demsar, B. Zupan, N. Aoki, M.J. Wall, T.H. Granchi, J.R. Beck |
[5] |
High
Confidence Association Rules for Medical Diagnosis
D. Gamberger, N. Lavrac, V. Jovanoski |
[6] |
An
HTTP Based Server for Temporal Abstractions
C. Larizza, R. Bellazzi, G. Lanzola |
[7] |
Visualization
of the MEDLINE Database for Prostate Cancer
X.C. Lei, P. Whitney, D. McQuerry, B. Hetzler, L.J. Korb |
[8] |
An
Architecture for Automated Development of Clinical Practice Guidelines
in Critical Care: Preliminary Report
J. Li, T.Y. Leong |
[9] |
Modelling
Multivariate Time Series
X. Liu, S. Swift, A. Tucker, G. Cheng, G. Loizou |
[10] |
Extracting
Patterns of Lymphocyte Fluorescence from Digital Microscope Images
T.W. Nattkemper, H. Ritter, W. Schubert |
[11] |
Questionnaire
Screening of Sleep Apnea Cases Using Fuzzy Knowledge Representation and
Intelligent Aggregation Techniques
D. Nettleton, L. Hernandez |
[12] |
Using
Mixtures of Experts on the GlucoWatch (R) Biographer
J.J. Oliver, R.T. Kurnik |
[13] |
Decision-Making
in Fuzzy Pieces of Evidence
A. Schuster, K. Adamson, D.A. Bell |
[14] |
Generating
Summaries from Retrieved Base Cases
A. Schuster, K. Adamson, D.A. Bell |
[15] |
Investigating
Electrocardiographic Features in Fuzzy Models for Cardiac Arrhythmia Classification
R. Silipo |
[16] |
Multiple
Alarm Management with Self-Organizing Maps
S. Tamminen, S. Pirttikangas, S. Nissilä, V. Pentikäinen,
K. Väinämö, J. Röning |
Workshop Schedule (provisional) and Organization
Details
Each regular paper is allocated 20 mins, of which 15 mins are allocated
for presentation and 5 mins for discussion, while each poster will be introduced
by the author (up to 2 slides, up to 2 mins).
The room will be provided with
-
an overhead projector,
-
a 35mm slide projector, and
-
a computer projector (LCD for use with PC etc, but no PC; resolution
of the projector: 800x600 or 1024x768).
-
but no internet connection
5:00 PM |
Introduction to IDAMAP: Past history, current state, and future
goals (Blaz Zupan) |
5:20 PM - 7:00 PM |
Temporal Reasoning
5:20 - 5:40 |
R. Bellazi, C. Larizza, S. Montani, M. Stefanelli
Intra-patients
Learning by Combining Clustering and Temporal Abstraction. |
5:40 - 6:00 |
C. Larizza, R. Bellazzi, G. Lanzola
An
HTTP Based Server for Temporal Abstractions |
6:00 - 6:20 |
S. Chakravarty, Y. Shahar
Specification
and Detection of Periodic Patterns in Clinical Data |
6:20 - 6:40 |
X. Liu, S. Swift, A. Tucker, G. Cheng, G. Loizo
Modelling
Multivariate Time Series |
6:40 - 7:00 |
R. Silipo
Investigating
Electrocardiographic Features in Fuzzy Models for Cardiac Arrhythmia Classification |
|
7:00 PM - 7:40 PM |
Poster Session and Break
An introduction of up to 2-minutes to each poster will precede the
poster session
|
7:40 PM - 9 PM |
Machine Learning and Data Mining I
|
9:00 - 9:10 |
Break |
9:10 PM - 10:30 PM
|
Machine Learning and Data Mining II
9:10 - 9:30 |
J.J. Oliver, R.T. Kurnik
Using
Mixtures of Experts on the GlucoWatch (R) Biographer |
9:30- 9:50 |
A. Schuster, K. Adamson, D.A. Bell
Generating
Summaries from Retrieved Base Cases |
9:50- 10:10 |
S. Tamminen, S. Pirttikangas, S. Nissilä, V. Pentikäinen,
K. Väinämö, J. Röning
Multiple
Alarm Management with Self-Organizing Maps |
10:10-10:30 |
D. Gamberger, N. Lavrac, V. Jovanoski
High
Confidence Association Rules for Medical Diagnosis |
|
Publication of Papers
Accepted papers will be published in the IDAMAP-99 working notes.
Workshop Registration
No extra registration. All registered AMIA 99 Fall Symposium members are
welcome to attend.
Last update Nov, 3 1999 by Silvia Miksch, silvia@ifs.tuwien.ac.at
Visitors since March 15, 1999: