A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _

G

g - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AutoRoutePanel.SimpleTSPSolver.Tour
 
gain - Variable in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer
 
gainLabel - Variable in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer.ClassVisControlPanel
 
gainSpinner - Variable in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer.ClassVisControlPanel
 
galaxyGradientGrey() - Static method in class at.tuwien.ifs.somtoolbox.visualization.ColorGradientFactory
Color gradient for Sky visualization
galaxyGradientYellow() - Static method in class at.tuwien.ifs.somtoolbox.visualization.ColorGradientFactory
Color gradient for Sky visualization
gamma - Variable in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer
 
gammaLabel - Variable in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer.ClassVisControlPanel
 
gammaSpinner - Variable in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer.ClassVisControlPanel
 
GapVisualiser - Class in at.tuwien.ifs.somtoolbox.visualization
This Visualizer provides the Gap visualiser, as described in Samuel Kaski, Janne Nikkilä, and Teuvo Kohonen. Methods for exploratory cluster analysis.
GapVisualiser() - Constructor for class at.tuwien.ifs.somtoolbox.visualization.GapVisualiser
 
GATE - Static variable in class at.tuwien.ifs.somtoolbox.layers.Unit
 
gateWeightLabels - Variable in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader.UnitInformation
 
gateWeights - Variable in class at.tuwien.ifs.somtoolbox.layers.Unit
 
gc - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector.UserTableModel
 
GeneralUnitPNode - Class in at.tuwien.ifs.somtoolbox.apps.viewer
The graphical representation of one SOM Unit, including labels, data items and class pie charts.
GeneralUnitPNode(int, int, double, double) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
Constructor for mnemonic (sparse) SOMs.
GeneralUnitPNode(Unit, CommonSOMViewerStateData, SOMLibClassInformation, SOMLibDataInformation, double, double) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
GeneralUnitPNode(Unit, CommonSOMViewerStateData, SOMLibClassInformation, SOMLibDataInformation, Point[][], double, double) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
GeneralUnitPNode(Unit, GeneralUnitPNode) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
GeneralUnitPNodeSerializer - Class in at.tuwien.ifs.somtoolbox.apps.viewer
replacement class for serializing and de-serializing a GeneralUnitPNode
GeneralUnitPNodeSerializer() - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNodeSerializer
 
GeneralUnitPNodeSerializer(GeneralUnitPNode) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNodeSerializer
 
generateAttributedSectionLabel(PieDataset, Comparable) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.PieChartPNode.CountLabeler
 
generateAttributedSectionLabel(PieDataset, Comparable) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.PieChartPNode.PercentageLabeler
 
generateDataInfo(String, String, String, String) - Static method in class at.tuwien.ifs.somtoolbox.apps.helper.SOMLibDataInfoGenerator
Static method taking input and output filename as argument.
generateDataInfo(BufferedReader, BufferedWriter, String, String) - Static method in class at.tuwien.ifs.somtoolbox.apps.helper.SOMLibDataInfoGenerator
Static method taking a Buffered Reader and BufferedWriter as argument.
generateOneVector(int) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
 
generatePoint(String, double[], double[]) - Static method in class at.tuwien.ifs.somtoolbox.apps.helper.DataGenerator
 
generatePoints(String, int, double[], double[]) - Static method in class at.tuwien.ifs.somtoolbox.apps.helper.DataGenerator
 
generatePoints(String, int, double, double, double, double) - Method in class at.tuwien.ifs.somtoolbox.apps.helper.DataSetGenerator
 
generateRandomDoubleMatrix1D(Random, int, boolean) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
 
generateRandomDoubleMatrix1D(int, boolean) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
 
generateRandomDoubleMatrix1D(int) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
 
generateRandomVector(int) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
Generates a random double[] with the given dimensionality, using a new random number generator.
generateRandomVector(Random, int) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
Generates a random double[] with the given dimensionality, using the given random number generator.
generateRandomVector(int, boolean) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
Generates a random double[] with the given dimensionality, using a new random number generator.
generateRandomVector(Random, int, boolean) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
Generates a random double[] with the given dimensionality, using the given random number generator.
generateReport(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
generateRhythmPatternsCheckBox - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.ExportDialog
 
generateSectionLabel(PieDataset, Comparable) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.PieChartPNode.CountLabeler
 
generateSectionLabel(PieDataset, Comparable) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.PieChartPNode.PercentageLabeler
 
generateVectorWithValue(int, int) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
 
generateWRandomWeightvectors() - Method in class at.tuwien.ifs.somtoolbox.input.MnemonicSOMLibFormatInputReader
Generates random weight vectors, but only for those units that are occupied.
GenericGUI - Class in at.tuwien.ifs.commons.gui.jsap
 
GenericGUI(Class<? extends SOMToolboxApp>) - Constructor for class at.tuwien.ifs.commons.gui.jsap.GenericGUI
Generate a GenericGUI based on the given SOMToolboxApp
GenericGUI(Class<? extends SOMToolboxApp>, String[]) - Constructor for class at.tuwien.ifs.commons.gui.jsap.GenericGUI
Generate a GenericGUI based on the given SOMToolboxApp
GenericPNodeScrollPane - Class in at.tuwien.ifs.somtoolbox.apps.viewer
A generic scrollable pane that holds a PNode and handles line and rectangle selection events via registered listeners.
GenericPNodeScrollPane(CommonSOMViewerStateData, PNode) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.GenericPNodeScrollPane
 
GenericPNodeScrollPane() - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.GenericPNodeScrollPane
 
get(int) - Method in class at.tuwien.ifs.somtoolbox.clustering.Cluster
 
get(int) - Method in class at.tuwien.ifs.somtoolbox.input.InputCorrections
 
get(String) - Method in class at.tuwien.ifs.somtoolbox.input.InputCorrections
 
get(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.EntropyAndPurityCalculator.LabelledCounterMapToBePutInCOMMONS
 
get(int) - Method in class at.tuwien.ifs.somtoolbox.structures.ComponentLine2D
 
get(int) - Method in class at.tuwien.ifs.somtoolbox.structures.ComponentLine3D
 
get(int) - Method in class at.tuwien.ifs.somtoolbox.structures.DoubleVector2D
 
get() - Method in class at.tuwien.ifs.somtoolbox.util.SwingWorker
Return the value created by the construct method.
get() - Method in class at.tuwien.ifs.somtoolbox.util.SwingWorker.ThreadVar
 
get2DUnits() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns all units with depth 0 of the layer
get3DPointsAsDoubles() - Method in class at.tuwien.ifs.somtoolbox.apps.helper.DataSetGenerator
 
get3DPointsAsFloats() - Method in class at.tuwien.ifs.somtoolbox.apps.helper.DataSetGenerator
 
getActualConfiguration(String, Unit[], int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
Returns an array with the actual identification configuration , of how the qualifier QM behaves
getAdaptiveCoordinates() - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
getAdditionalParams() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.MnemonicSOMSettingsPanel
 
getAdditionalParams() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMModelSettingsPanel
 
getAlbum() - Method in class at.tuwien.ifs.somtoolbox.data.metadata.MP3VectorMetaData
 
getAlgorithmType() - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.MultiDocumentSummarisationPanel
 
getAllChildrenUntil(int, ClusterNode, ArrayList<ClusterNode>) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusteringTree
Searches the clusters that are less or equal lvl and stores their children (ClusterNodes) which are > lvl.
getAllClusteringElements() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusteringTree
 
getAllClusterLabels() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getAllDensities(InputVectorDistanceMatrix, double) - Method in class at.tuwien.ifs.somtoolbox.visualization.PMatrix
 
getAllDirections() - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
Get a Hastable[] containing the per-dimension directions to draw on each unit of the som.
getAllFilesInRoot(File, String...) - Static method in class at.tuwien.ifs.somtoolbox.util.FileUtils
Finds all files matching any of the given extensions, in any subdirecotry of the given root path
getAllFilesInRoot(LinkedList<File>, File, FileFilter) - Static method in class at.tuwien.ifs.somtoolbox.util.FileUtils
 
getAllMappedDataNames(boolean) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns all mapped inputs from all the units of the layer in an array.
getAllMappedDataNames() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getAllMappedDataNamesAsList() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getAllSubMaps() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getAllSubMaps() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getAllUnits() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getAllUnits() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns all units of the layer in an array.
getAllUnits() - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns an array of all units in the map layer; the specific order of the units is unspecified.
getAllUnits() - Method in class at.tuwien.ifs.somtoolbox.layers.MnemonicGrowingLayer
 
getAllUnitsContainingClass(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getApp() - Method in class at.tuwien.ifs.commons.gui.SOMToolboxAppChooser.MainRadioButton.MainRadioButtonModel
 
getArgument() - Method in class at.tuwien.ifs.commons.gui.jsap.BooleanEditor
 
getArgument() - Method in class at.tuwien.ifs.commons.gui.jsap.EnumerationEditor
 
getArgument() - Method in class at.tuwien.ifs.commons.gui.jsap.FileEditor
 
getArgument() - Method in class at.tuwien.ifs.commons.gui.jsap.IntegerEditor
 
getArgument() - Method in class at.tuwien.ifs.commons.gui.jsap.OptionEditor
 
getArgument() - Method in class at.tuwien.ifs.commons.gui.jsap.StringEditor
 
getArrows() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
getArtist() - Method in class at.tuwien.ifs.somtoolbox.data.metadata.MP3VectorMetaData
 
getAttributeLabel(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the label (that is the name defined for an attribute in the template vector file) for the specified attribute.
getAudioFile() - Method in class at.tuwien.ifs.somtoolbox.data.metadata.AudioVectorMetaData
Get the file this MetaData is describing.
getAudioPlayer() - Method in class at.tuwien.ifs.somtoolbox.properties.SOMViewerProperties
Returns the path name to call the preferred audio player to play audio files from PlaySOM Panel.
getAutoRoutePanel() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AutoRoutePanel
 
getAvailableMetricClasses() - Static method in class at.tuwien.ifs.somtoolbox.layers.metrics.Metrics
 
getAvailableMetrics() - Static method in class at.tuwien.ifs.somtoolbox.layers.metrics.Metrics
 
getAvailablePalettes() - Static method in class at.tuwien.ifs.somtoolbox.visualization.Palettes
 
getAvailableVisualizationNames() - Static method in class at.tuwien.ifs.somtoolbox.visualization.Visualizations
 
getAvailableVisualizations() - Static method in class at.tuwien.ifs.somtoolbox.visualization.Visualizations
 
getAvatarKeys() - Method in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
getAvatarNames() - Method in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
getAvatarPositions(String) - Method in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
getAXPos() - Method in class at.tuwien.ifs.somtoolbox.layers.AdaptiveCoordinatesVirtualUnit
 
getAYPos() - Method in class at.tuwien.ifs.somtoolbox.layers.AdaptiveCoordinatesVirtualUnit
 
getBackgroundImage() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getBackgroundImageHeight() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getBackgroundImageWidth() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getBaseDir() - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibDataInformation
 
getBasicCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
 
getBasicMap(String, Palette, int, int, boolean, boolean, boolean) - Method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
getBasicMapKey(String, Palette, int, boolean, boolean) - Method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
getBestContext() - Method in class at.tuwien.ifs.somtoolbox.layers.Label
 
getBestContextUnitLabels(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getBestContextUnitLabels(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getBestContextUnitLabels(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getBestContextUnitLabels(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getBestContextWeights() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
 
getBestFittingColor(double, double) - Method in class at.tuwien.ifs.somtoolbox.visualization.EntropyVisualizer
Spreads the current Region Entropy Error along the whole Palette Interval.
getBinAssignment(int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getBinCentres(int[][], int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getBinCentres(int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getBinCentresAsList(int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getBinDeviation(int[][], int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getBinIndex(double, double[]) - Static method in class at.tuwien.ifs.somtoolbox.util.ArrayUtils
 
getBLConstraint() - Method in enum at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel.Orientation
 
getBoolDataProps(int, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
FIXME: split this into simple single getter methods...
getBorder(Color) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
 
getBorder() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
 
getBorderLine() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PathMerger
 
getBorderSentence(DoubleArrayList) - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.DocumentDisplayer
 
getBorderWord(int) - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.DocumentDisplayer
 
getBorderWord() - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.DocumentDisplayer
 
getBreadth() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.Shift
 
getBtnAddColor() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes btnAddColor
getBtnApply() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes btnApply
getBtnCancel() - Method in class at.tuwien.ifs.commons.gui.SOMToolboxAppChooser
 
getBtnClearMerges() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
getBtnClose() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes btnClose
getBtnDelColor() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes btnDelColor
getBtnHighlightPath() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
getBtnHitHist() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
getBtnLaunch() - Method in class at.tuwien.ifs.commons.gui.SOMToolboxAppChooser
 
getBtnLogFileSaver() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes btnLogFileSaver
getBtnMergeConcat() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
getBtnMergeLineBased() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
getBtnMergePathInputSpace() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
getBtnMergePathMapSpace() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
getBtnMergeUnitBased() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
getBtnNew() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes btnNew
getBtnOutDirFileSaver() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes btnOutDirFileSaver
getBtnReversePath() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
getBtnSave() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes btnSave
getBtnSaveJava() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes btnSaveJava
getBtnSaveMatLab() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes btnSaveMatLab
getBtnSaveXML() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes btnSaveXML
getBtnServerCtrl() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
This method initializes btnServerCtrl
getBtnTrain() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes btnTrain
getBtnTVFileOpen() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes btnTVFileOpen
getBtnUnitFileOpen() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.MnemonicSOMSettingsPanel
This method initializes btnUnitFileOpen
getBtnUsePath() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
getBtnVecFileOpen() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes btnVecFileOpen
getByDegree(int) - Static method in enum at.tuwien.ifs.somtoolbox.layers.GrowingLayer.Rotation
 
getByNameDistanceSorted(double[], Collection<String>, DistanceMetric) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
Retrieves the InputDatum corresponding to the given input names, and sorted by their distance to the given vector.
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
The key of a cache is created as follows: VisualisationShortName + Hashcode of the SOM + Width + Height + Opacity.
Sub-classes might add more information to the cache, if needed.
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractMatrixVisualizer
 
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ActivityHistogram
 
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.AdaptiveCoordinatesVisualizer
 
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ClusterConnectionsVisualizer
 
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ComponentPlanesVisualizer
 
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.FlowBorderlineVisualizer
 
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.FuzzyColourCodingVisualiser
 
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.MinimumSpanningTreeVisualizer
 
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.NeighbourhoodGraph
 
getCacheKey() - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.PMatrix
 
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.RhythmPatternsAttributeVisualizer
 
getCacheKey(GrowingSOM, int, int, int, String) - Method in class at.tuwien.ifs.somtoolbox.visualization.RhythmPatternsAttributeVisualizer
 
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.SmoothedDataHistograms
 
getCacheKey(GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer
 
getCanvas() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GenericPNodeScrollPane
 
getCellEditorValue() - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ButtonCellEditor
 
getCellEditorValue() - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ColorCellEditor
 
getCellUnits() - Method in class at.tuwien.ifs.somtoolbox.util.growingCellStructures.GrowingCellTetraheder
 
getCenterPanel() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes centerPanel
getCentroid() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.Cluster
 
getCentroid() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
 
getCentroidsPerAvatar(int, double[][][]) - Static method in class at.tuwien.ifs.somtoolbox.apps.SecondLifeFileReaderMain
 
getChild1() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
returns the first child cluster
getChild2() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
returns the second child cluster
getChildLevel(GHSOMLevelLayer) - Method in class at.tuwien.ifs.somtoolbox.models.GHSOMLevelLayer
creates the children-layer of a levelLayer
getChildren() - Method in class at.tuwien.ifs.somtoolbox.models.GHSOMLevelLayer
returns the childrenLevelLayer of this levelLayer or null, if no children exist
getChkCreateDWM() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes chkCreateDWM
getChkInterpol() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes chkInterpol
getChkLabelSOM() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes chkLabelSOM
getChkLernrate() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes chkLernrate
getChkMergeDebugPrint() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
getChkNormalized() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes chkNormalized
getChkSigma() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes chkSigma
getChkSparse() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes chkSparse
getChkUseGradientPoints() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes chkUseGradientPoints
getChkVisible() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes chkVisible
getChosenFile(boolean, Component, String, JFileChooser) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.Commons
Gives the user the possibility to select a filename using the Filechooser-Dialog
getClass(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
getClassAt(int) - Method in class at.tuwien.ifs.commons.models.ClassComboBoxModel
 
getClassAttributeName() - Method in class at.tuwien.ifs.somtoolbox.data.ARFFFormatInputData
 
getClassAttributeName() - Method in class at.tuwien.ifs.somtoolbox.data.MarsyasARFFInputData
 
getClassColor(int) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
Get the colour for the given class index.
getClassColorRGB(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns an array of length three containing the r,g,b values of the colour used to colour the specified class
getClassColors() - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
Get all class colours.
getClassDistribution() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
Returns the Class Distribution array for each Unit of the Map
getClassDistributionInCluster(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns for the given cluster, how many input elements of the different classses are mapped to units of this cluster returns an array, that contains for each class, how many input vectors belonging to this class are mapped to units of the cluster
getClassEntropy(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
Returns the entropy for class with index
getClasses() - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
Returns the class names of the Region on [0] and its hits on [1]
getClassesForUnit(int, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns an array containing the counting for each class for the given unit
getClassesfromFatherGrid() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
Puts the Fathers Grid Classes in this grid
getClassFileDependantQualities() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
 
getClassfromGrid(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
 
getClassIdentifier(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
Returns the string representation of the given int value
FIXME: refactor this!
getClassifiedUnits(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
Returns the int [] of classified units for identifier Name
getClassIndex(String) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
Gets the index number for a given class label.
getClassIndexForInput(String) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
 
getClassIndexOfInput(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the index of the class the input vector specified by its index belongs to
getClassInfo() - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
getClassInfo() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
 
getClassInfoFileName() - Method in class at.tuwien.ifs.somtoolbox.properties.SOMProperties
 
getClassInfoPath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
getClassInformationFilename() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the path of the file containin the class information
getClassLegend() - Method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
getClassLegendColorFast(int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
This implementation does not check for the pie charts (GeneralUnitPNode.pieChartDetailNodes to be initialised and should therefore be only used if it is for sure != null.
getClassLegendColors() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getClassLegendColors() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
 
getClassLegendColors() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
getClassLegendNames() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getClassLegendNames() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
 
getClassMeanUnit(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the mean x and y coordinates (and the standard derivation) of a class the following is done: for all input elements of the given class, the sum of the x coordinates of the unit the item is mapped onto is build, and then divided by the number of input items in this class.
getClassMeanVector(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the mean vector of all input items belonging to the given class
getClassMix(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns every other class+hits contained in the regions with classmembers from the given index, or null if index exceeds the possible number of classes
getClassName(int) - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
getClassName(int) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
Gets the class label name for a given input vector index.
getClassName(String) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
Gets the class name for a vector name.
getClassNames() - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
getClassNames() - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
Returns the names of the classes.
getClassPieChart(int, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
getClassPiechartMode() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.CommonSOMViewerStateData
 
getClassPurity1() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns for i = 0 ...
getClassPurity2(int[]) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns an textual interpretation of how good the SOM separates the different classes this is done quite simple by grouping the error to: less than 5% less than 10% less than 20% less than 50% less than 70% less than 85% less or equal than 100%
getClassRangesInUnits() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
Returns an Array containing the Range in SOMUnits from all Classes, or null if no Class info is available
getclassTrail(ArrayList) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
Goes through the given list and tries to see which classes are connected
getClassType() - Method in class at.tuwien.ifs.somtoolbox.data.SOMVisualisationData
 
getClassWithIndex(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
Returns the SOMClass with the specified index or NULL otherwise
getClient(HttpExchange) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.httphandler.PocketSOMConfigProvider
 
getClusterAssignment(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusteringTree
 
getClusterCentroids() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
Get a double[][] of all cluster centroids.
getClusteringAlgName() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.CompleteLinkageTreeBuilder
 
getClusteringAlgName() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeansTreeBuilder
 
getClusteringAlgName() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.SingleLinkageTreeBuilder
 
getClusteringAlgName() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.TreeBuilder
 
getClusteringAlgName() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.WardsLinkageTreeBuilder
 
getClusteringAlgName() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.WardsLinkageTreeBuilderAll
 
getClusteringInto(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusteringTree
Returns the borders and the Labels of the clustering into l clusters and all other currently painted cluster's borders and labels
getClusteringInto(int, boolean) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusteringTree
Recreates the ClusterElementsStorageNode for layer l.
getClusteringTree() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getClusteringTreeBuilder() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getClusterLabelsByLevel() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getClusterLevelClasses() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
Gets the specific Classes for the Cluster Area, Used if this.fatherGrid != null & Index = 0
getClusterMeanPoint(int[][], int, int, GrowingSOM) - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
Try to find a mean-point for a cluster
getClusterName(ClusterNode, int, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
Tries to name a cluster by the input data mapped to units lying within the cluster For naming the cluster, some very simple heuristics are used: First, if there are any labels of the clusters, which correpsond to 0/1 attributes, and their values are all 0 (or 1) in the cluster, the name of this attribute is included to the name of the cluster.
getClusterNo() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
getClusterNodes(int, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the cluster node representing the cluster at the specified level
getClusterNodes(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.UnitKMeans
Returns the ClusterNodes for the given level.
getClusters() - Method in class at.tuwien.ifs.somtoolbox.clustering.WardClustering
 
getClusters() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
 
getClustersAtLevel() - Method in interface at.tuwien.ifs.somtoolbox.clustering.HierarchicalClusteringAlgorithm
Returns the clusters at all levels
getClustersAtLevel(int) - Method in interface at.tuwien.ifs.somtoolbox.clustering.HierarchicalClusteringAlgorithm
Returns the cluster at a certain level, where the level equals the number of clusters
getClustersAtLevel(int) - Method in class at.tuwien.ifs.somtoolbox.clustering.WardClustering
Returns the clustering at a certain level, where the level equals the number of clusters
getClustersAtLevel() - Method in class at.tuwien.ifs.somtoolbox.clustering.WardClustering
 
getClustersByRelativeThreshold(double) - Method in class at.tuwien.ifs.somtoolbox.clustering.WardClustering
Returns the clustering at a certain level indicated by the relative merge cost for that level, compared to the costs of merging all data items
getClustersByThreshold(double) - Method in class at.tuwien.ifs.somtoolbox.clustering.WardClustering
Returns the clustering at a certain level indicated by the merge cost for that level
getClusterTree() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
creates and returns the clustering tree for this SOM the cluster method used is WardsLinkageTreeBuilder.
getClusterVariances() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
 
getCmbMetric() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes cmbMetric
getCmbMetricModel() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
 
getCmbModel() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes cmbModel
getCmbModelModel() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
 
getCmbQualityMeasure() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes cmbQualityMeasure
getCmbQualityMeasureModel() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
 
getCollectionTermFrequency() - Method in class at.tuwien.ifs.somtoolbox.data.TemplateVectorElement
Gets the term frequency in the whole collection.
getColor(int) - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
getColor() - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
Gets the current colour of this label.
getColor() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ColorChooser
 
getColor(double) - Method in class at.tuwien.ifs.somtoolbox.visualization.ClusterConnectionsVisualizer
Gets the colour representing a certain distance value.
getColor(double) - Method in class at.tuwien.ifs.somtoolbox.visualization.ColorGradient
 
getColor(float) - Method in class at.tuwien.ifs.somtoolbox.visualization.metromap.JetColorMap
 
getColor(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.metromap.MetroColorMap
 
getColor(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
getColorConstrained(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
getColoredCluster() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
 
getColorPanel() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes colorPanel
getColors() - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
getColors() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ClassLegendPane
 
getColors() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ColourLegendTable
Deprecated.  
getColors(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.metromap.JetColorMap
 
getColors(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.metromap.MetroColorMap
 
getColors() - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
GetColour(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
 
getColour(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
getColourCount() - Method in class at.tuwien.ifs.somtoolbox.visualization.metromap.MetroColorMap
 
getColours(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
getColumnClass(int) - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
getColumnClass(int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector.UserTableModel
 
getColumnCount() - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
getColumnCount() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector.UserTableModel
 
getColumnName(int) - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
getColumnName(int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector.UserTableModel
 
getColumns() - Method in class at.tuwien.ifs.somtoolbox.util.JMultiLineToolTip
 
getCommandLine() - Method in class at.tuwien.ifs.commons.gui.jsap.FlaggedOptionControl
 
getCommandLine() - Method in class at.tuwien.ifs.commons.gui.jsap.ParameterControl
 
getCommandLine() - Method in class at.tuwien.ifs.commons.gui.jsap.SwitchControl
 
getCommandLine() - Method in class at.tuwien.ifs.commons.gui.jsap.UnflaggedOptionControl
 
getComment() - Method in class at.tuwien.ifs.somtoolbox.data.TemplateVectorElement
Gets the comment.
getCommonPrefix(String, String) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
Returns the common starting portion of the two Strings, or an empty String if there is no common part.
getCommonPrefix(Collection<String>) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
 
getCommonPrefix(String[]) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
 
getCommonSuffix(String, String) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
Returns the common starting portion of the two Strings, or an empty String if there is no common part.
getCommonSuffix(Collection<String>) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
 
getCommonSuffix(String[]) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
 
getCommonVectorLabelPrefix() - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getCommonVectorLabelPrefix() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the longest substring that is common for all input data items.
getCommonVectorLabelPrefix() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getCompactness() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticClass
 
getComparedQMRegionOccurances(String, String, Unit[], int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
Returns an array of Units, witch have Intersection of QM Name1 & Name 2 with the given type of operation
getComponent() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer.MyJCheckBoxMenuItem
 
getComponentName(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
VISUALISATION IMPROVEMENTS ***********************
getComponentNames() - Method in class at.tuwien.ifs.somtoolbox.input.SOMPAKFormatInputReader
 
getComponentNames() - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
getComponentPlane(int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getComponentPlane(int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getComponentPlane(int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getComponentPlane(int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getComponentPlane(int) - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns a component plane of the component specified by the argument component.
getComponentPlane(int, int) - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns a component plane of the component specified by the argument component.
getComponentPlane3D(int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getComponentsInDirection(Point2D, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
Gets components which have links in the given direction.
getCompressionValue() - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.MultiDocumentSummarisationPanel
 
getConnectedTetraheders() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellUnit
 
getContentBackground() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
getContentBorder() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
getContentDirection() - Method in enum at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel.Orientation
 
getContentPane() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
getContentSubType() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getContentSubType() - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Gets the content sub-type.
getContentType() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getContentType() - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Gets the content type.
getContextGateLabels() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
 
getContextGateUnitLabels(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getContextGateUnitLabels(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getContextGateUnitLabels(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getContextGateUnitLabels(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getControlMenu(String) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ControlCollector
 
getControlPanel() - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
 
getControlPanel() - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
Gets the visualisation control panel.
getCount(T) - Method in class at.tuwien.ifs.somtoolbox.util.ElementCounter
 
getCount() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.Shift
 
getCounter() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.EntropyAndPurityCalculator.LabelledCounterMapToBePutInCOMMONS
here we count the sum of all entries
getCov(GrowingLayer) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ComponentPlaneClusteringFrame
 
getCreationType() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ArrowPNode
 
getCreationType() - Method in class at.tuwien.ifs.somtoolbox.input.InputCorrections.InputCorrection
 
getCurrentClusteringTree() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getCurrentLevel() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.GHSOMNavigationPanel
 
getCurrentlySelectedPalette() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
getCurrentPalette() - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractMatrixVisualizer
 
getCurrentPalette() - Method in interface at.tuwien.ifs.somtoolbox.visualization.MatrixVisualizer
Returns the Palette this visualisation currently is set to.
getCurrentPos() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlaySOMPlayer
 
getCurrentSong() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlaySOMPlayer
 
getCurrentSongID() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlaySOMPlayer
 
getCurrentSongIndex() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
getCurrentStep() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.StatusBar
 
getCurrentStep() - Method in interface at.tuwien.ifs.somtoolbox.util.ProgressListener
 
getCurrentStep() - Method in class at.tuwien.ifs.somtoolbox.util.StdErrProgressWriter
 
getCurrentTime() - Static method in class at.tuwien.ifs.somtoolbox.apps.initEval.Measure
Delegate method for getting the current time
getCurrentVisualization() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getCurrentVisualization() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
 
getData() - Method in class at.tuwien.ifs.somtoolbox.apps.helper.DataSetGenerator
 
getData() - Method in class at.tuwien.ifs.somtoolbox.clustering.Cluster
 
getData() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getData(String) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getData() - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Return the input data as a double array, i.e.
getData(String) - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Returns the vectors of all inputs associated with the given class name
getData(String) - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
getData() - Method in class at.tuwien.ifs.somtoolbox.data.SOMVisualisationData
 
getData() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getData() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getData() - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.NavigationPanel
 
getData() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
 
getData3D() - Method in class at.tuwien.ifs.somtoolbox.apps.helper.DataSetGenerator
 
getDatabaseName() - Method in class at.tuwien.ifs.somtoolbox.properties.FileProperties
 
getDatabasePassword() - Method in class at.tuwien.ifs.somtoolbox.properties.FileProperties
 
getDatabaseServerAddress() - Method in class at.tuwien.ifs.somtoolbox.properties.FileProperties
 
getDatabaseTableNamePrefix() - Method in class at.tuwien.ifs.somtoolbox.properties.FileProperties
 
getDatabaseUser() - Method in class at.tuwien.ifs.somtoolbox.properties.FileProperties
 
getDataDisplayName(String) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibDataInformation
 
getDataInfo() - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
getDataInputVariant() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
getDataIntervals() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getDataIntervals() - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Return the min and max values for each feature, in a matrix of dim x 2
getDataItems() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
getDataLocation(String) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibDataInformation
 
getDataNames() - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
 
getDataNamesInClass(String) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
 
getDataNamesPerClass() - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
Returns an array of data names for each class.
getDataSetAsString() - Method in class at.tuwien.ifs.somtoolbox.apps.helper.DataSetGenerator
 
getDatasetInfo() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getDatasetName() - Static method in class at.tuwien.ifs.somtoolbox.apps.initEval.EvaluationMain
 
getDataSource() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getDataSource() - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
returns the name/URI/etc.
getDataWinnerMapping() - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
getDataWinnerMappingFileName(String, String, String, boolean) - Static method in class at.tuwien.ifs.somtoolbox.output.SOMLibMapOutputter
 
getDataWinnerMappingPath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
getDecimalFormat(int, boolean, int) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
Returns a DecimalFormat with the given number of fractionDigits, with or without trailing zeros.
getDecimalFormat(int) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
 
getDecodedFileName(File) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.DecoderThread
 
getDecodedFileName(File, String, String) - Static method in class at.tuwien.ifs.somtoolbox.audio.DecoderThread
 
getDecoratorPadding() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
getDecoratorPadding() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel.TitleRow
 
getDefaultControls() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ControlCollector
 
getDefaultPalette() - Method in class at.tuwien.ifs.somtoolbox.apps.server.ServerSOM
 
getDefaultPalette() - Static method in class at.tuwien.ifs.somtoolbox.visualization.Palettes
 
getDegree(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticNode
Returns the String representation of a SemanticNodes Coordinates
FIXME: refactor this
getDepth() - Static method in class at.tuwien.ifs.somtoolbox.models.GHSOMLevelLayer
 
getDescription() - Method in class at.tuwien.ifs.commons.util.io.ExtensionFileFilterSwing
 
getDescription() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.MySOMVisualisationDataFileFilter
 
getDescription() - Method in class at.tuwien.ifs.somtoolbox.util.FileUtils.SOMDescriptionFileFilter
 
getDescription() - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
getDeviation(int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getDiameter(int) - Method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
getDiameter() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellUnit
 
getDifferences(String[]) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
 
getDifferences() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
 
getDim() - Method in class at.tuwien.ifs.somtoolbox.data.InputDatum
Returns the dimensionality of the vector.
getDim() - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getDim() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the dimensionality of the weight vectors.
getDim() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getDim() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns the dimensionality of the weight vectors.
getDim() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
 
getDimension(int, int, int, double[][][][]) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Needed for mnemonic (sparse) SOMs to find out the vector dimension, by finding the first non-null vector in the array
getDimensionality(String) - Static method in class at.tuwien.ifs.somtoolbox.data.SOMLibSparseInputData
 
getDirection(Point2D, Point2D) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
returns the direction between two nodes based on the following scheme: 0 7 left up up right up 1 \ | / 6 left - * - right 6 / | \ 5 left down down right down 3 4
getDirection(Point3d, Point3d) - Method in class at.tuwien.ifs.somtoolbox.visualization.Snapper3D
returns the direction between two nodes based on the following scheme: 0 7 left up up right up 1 \ | / 6 left - * - right 6 / | \ 5 left down down right down 3 4
getDirectionArray(Point2D, Point2D) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
get a direction array for the given points its indices are set to on for outgoing directions and it takes the form given in
getDirectionArray(Point2D, Point2D, int[]) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
update a given direction array for the given points its indices are set to on for outgoing directions and it takes the form given in
getDirectoryChooser(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
getDisplayLabel() - Method in class at.tuwien.ifs.somtoolbox.data.metadata.AbstractVectorMetaData
Returns a String to display on screen.
getDisplayLabel() - Method in class at.tuwien.ifs.somtoolbox.data.metadata.AudioVectorMetaData
 
getDisplayLabel() - Method in class at.tuwien.ifs.somtoolbox.data.metadata.EmtpyVectorMetaData
 
getDisplayLabel() - Method in class at.tuwien.ifs.somtoolbox.data.metadata.MP3VectorMetaData
 
getDisplayName() - Method in class at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizerInstance
 
getDistance(int, int) - Method in class at.tuwien.ifs.somtoolbox.data.distance.FullMemoryInputVectorDistanceMatrix
 
getDistance(int, int) - Method in class at.tuwien.ifs.somtoolbox.data.distance.InputVectorDistanceMatrix
Return the distance between input vectors x and y.
getDistance(int, int) - Method in class at.tuwien.ifs.somtoolbox.data.distance.LeightWeightMemoryInputVectorDistanceMatrix
Finds the index in vector for the matrix position (x,y); see LeightWeightMemoryInputVectorDistanceMatrix.distances
getDistance(int, int) - Method in class at.tuwien.ifs.somtoolbox.data.distance.RandomAccessFileInputVectorDistanceMatrix
 
getDistance(double[], double[]) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getDistance() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.IntrinsicDistance.UnitInfo
 
getDistance() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.TopographicProduct.DistanceTag
 
getDistance() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.Trustworthiness_NeighborhoodPreservation.DistanceTag
 
getDistance(int[], int[]) - Static method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
 
getDistance() - Method in class at.tuwien.ifs.somtoolbox.util.comparables.InputDistance
 
getDistance() - Method in class at.tuwien.ifs.somtoolbox.util.comparables.InputNameDistance
 
getDistance() - Method in class at.tuwien.ifs.somtoolbox.util.comparables.UnitDistance
 
getDistanceMatrix() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getDistances(int, DistanceMetric) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
Returns the distances to the index of the given vector of the dataset.
getDistances(int) - Method in class at.tuwien.ifs.somtoolbox.data.distance.FullMemoryInputVectorDistanceMatrix
 
getDistances(int) - Method in class at.tuwien.ifs.somtoolbox.data.distance.InputVectorDistanceMatrix
Return the distances to all vectors from input x.
getDistances(int) - Method in class at.tuwien.ifs.somtoolbox.data.distance.LeightWeightMemoryInputVectorDistanceMatrix
This implementation is not of good performance, as the matrix row is always constructed on the fly.
getDistancesFlat() - Method in class at.tuwien.ifs.somtoolbox.data.distance.InputVectorDistanceMatrix
Gets all the distances in a single flat array avoiding duplicates from the pairwise distances, thus of the size of numVectors * (numVectors - * 1) / 2.
This is a default implementation always constructing the array on the fly using the InputVectorDistanceMatrix.getDistance(int, int) method.
getDistancesFlat() - Method in class at.tuwien.ifs.somtoolbox.data.distance.LeightWeightMemoryInputVectorDistanceMatrix
This implementation is of high performance, as it returns only the already internally constructed array.
getDistancesFlatAsMatrix() - Method in class at.tuwien.ifs.somtoolbox.data.distance.InputVectorDistanceMatrix
 
getDistanceToCentroid(double[]) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.Cluster
Get the distance of a given instance to this cluster's centroid.
getDistanceValuesOnly(Collection<InputDistance>) - Static method in class at.tuwien.ifs.somtoolbox.util.comparables.InputDistance
 
getDistinctAvatarNames() - Method in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
getDists(int) - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
Returns an array of double values containing the distances between the input datum and the best-matching units sorted ascending.
getDocument() - Method in class at.tuwien.ifs.somtoolbox.summarisation.parser.DocumentParser
 
getDocument() - Method in class at.tuwien.ifs.somtoolbox.summarisation.parser.HeadlineTextParser
 
getDocumentFrequency(String) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibTemplateVector
 
getDocumentFrequency() - Method in class at.tuwien.ifs.somtoolbox.data.TemplateVectorElement
Gets the document frequency.
getDocumentPath() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.DocViewPanel
 
getDocumentScores(int) - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.ResultHandler
 
getDocumentScores() - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.ResultHandler
 
getDocumentSuffix() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.DocViewPanel
 
getDocumentTableName() - Method in class at.tuwien.ifs.somtoolbox.database.DBConnector
 
getDocumentTermsTableName() - Method in class at.tuwien.ifs.somtoolbox.database.DBConnector
 
getDotColor() - Method in class at.tuwien.ifs.somtoolbox.apps.UnitFileViewer
 
getDumpEvery() - Method in class at.tuwien.ifs.somtoolbox.properties.SOMProperties
Default = -1 --> do not dump.
getDurationSince(long) - Static method in class at.tuwien.ifs.somtoolbox.apps.initEval.Measure
 
getDwFilePath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.RunResultSpecifierPane
 
getDWFilePath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getDWPane() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.RunResultSpecifierPane
creates and returns the Panel that contains the Values for specifying the location of the .dw file
getEdgeNodes() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticClass
 
getEditableReportAtributesPane() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
Return the panel holding the controls to change the report options
getEditor() - Method in class at.tuwien.ifs.commons.gui.jsap.FlaggedOptionControl
 
getEditor() - Method in class at.tuwien.ifs.commons.gui.jsap.ParameterControl
 
getEditor() - Method in class at.tuwien.ifs.commons.gui.jsap.SwitchControl
 
getEditor() - Method in class at.tuwien.ifs.commons.gui.jsap.UnflaggedOptionControl
 
getElement(String) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibTemplateVector
 
getElement(int) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibTemplateVector
 
getElement(int) - Method in interface at.tuwien.ifs.somtoolbox.data.TemplateVector
returns the template vector element for the feature/attribute at the given position
getElement(int, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMConfigurationProfile
 
getElementAt(int) - Method in class at.tuwien.ifs.commons.models.ClassComboBoxModel
 
getElementAt(int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.LineListModel
getElementAt
getElementAt(int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList.PlayListModel
 
getEmbeddedPaletteSelector() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
 
getEmptyNodeTrail(ArrayList<SemanticNode>) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
Returns a list containing all connect/unconnected parts of the empty units
getEncodedFile() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.DecoderThread
 
getEncodedFile() - Method in class at.tuwien.ifs.somtoolbox.audio.DecoderThread
 
getEnd() - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Edge
 
getEndX() - Method in class at.tuwien.ifs.somtoolbox.util.Cuboid
 
getEndY() - Method in class at.tuwien.ifs.somtoolbox.util.Cuboid
 
getEndZ() - Method in class at.tuwien.ifs.somtoolbox.util.Cuboid
 
getEntropy() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.EntropyAndPurityCalculator
 
getEntryByParamID(String) - Static method in enum at.tuwien.ifs.somtoolbox.apps.helper.SomFilePacker.SomFileEntries
 
getEP() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
Returns the Editable Report Properties for the Semantic Report
getErrorDetails(String, int) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibTemplateVector
 
getErrorMessage(Exception) - Method in class at.tuwien.ifs.somtoolbox.data.DataBaseSOMLibSparseInputData
 
getErrorMessage(String, String, int) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibTemplateVector
 
getErrorUnit(QualityMeasure, String) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns the unit having the highest quantization error.
getEuclidean() - Static method in class at.tuwien.ifs.somtoolbox.clustering.functions.ComponentLine2DDistance
 
getEuclidean() - Static method in class at.tuwien.ifs.somtoolbox.clustering.functions.ComponentLine3DDistance
 
getExpandedUnits(GrowingLayer, QualityMeasure, String, double, double) - Method in class at.tuwien.ifs.somtoolbox.models.GHSOM
 
getExtensions() - Method in class at.tuwien.ifs.somtoolbox.data.SOMVisualisationData
 
getExtremes() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
GetExtremes() - Method in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
scans the data in ContourPlot.z in order to assign values to ContourPlot.zMin and ContourPlot.zMax
getFactor(int) - Method in class at.tuwien.ifs.somtoolbox.util.comparables.ComponentRegionCount
 
getFactorValue() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
 
getFarthestNeighbor(GrowingCellUnit) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getFeatureDensities() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
Returns feature densities statistics of the input data, namely a mapping from the number of input objects a specific feature is not zero in, to the total number of features with that density .
getFeatureDensity() - Method in class at.tuwien.ifs.somtoolbox.data.InputDatum
 
getFeatureMatrixColumns() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getFeatureMatrixColumns() - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Gets the number of columns before vectorisation.
getFeatureMatrixRows() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getFeatureMatrixRows() - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Gets the number of rows before vectorisation.
getFeatureWeights() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
 
getFileChooser() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.CommonSOMViewerStateData
 
getFileChooser() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ClusteringControl
 
getFileChooser(Component, JFileChooser, JComponent) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.ExportUtils
 
getFileChooser(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
getFileChooser(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.RunResultSpecifierPane
 
getFileName() - Method in class at.tuwien.ifs.somtoolbox.data.SOMVisualisationData
 
getFileNames() - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.NavigationPanel
 
getFileNames() - Method in class at.tuwien.ifs.somtoolbox.summarisation.parser.Scorer
 
getFileNames() - Method in class at.tuwien.ifs.somtoolbox.summarisation.parser.SentenceParser
 
getFileNameSuffix() - Static method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getFileNameSuffix() - Static method in class at.tuwien.ifs.somtoolbox.data.ARFFFormatInputData
 
getFileNameSuffix() - Static method in class at.tuwien.ifs.somtoolbox.data.ESOMInputData
 
getFileNameSuffix() - Static method in class at.tuwien.ifs.somtoolbox.data.RandomAccessFileSOMLibInputData
 
getFileNameSuffix() - Static method in class at.tuwien.ifs.somtoolbox.data.SimpleMatrixInputData
 
getFileNameSuffix() - Static method in class at.tuwien.ifs.somtoolbox.data.SOMPAKInputData
 
getFileNameSuffix() - Static method in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
 
getFilePath(JSAPResult, String) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.AbstractOptionFactory
 
getFilePath(Component, JFileChooser, String) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.ExportUtils
 
getFilePath(Component, JFileChooser, String, FileFilter) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.ExportUtils
 
getFilePath() - Method in class at.tuwien.ifs.somtoolbox.input.ESOMFormatInputReader
 
getFilePath() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the name of the path where the files are located.
getFilePath() - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibFormatInputReader
 
getFilePath() - Method in class at.tuwien.ifs.somtoolbox.input.SOMPAKFormatInputReader
 
getFileType(Object[]) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.MIMETypes
get the filetype for a given selection (e.g.
getFileType(Object) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.MIMETypes
 
getFirst() - Method in class at.tuwien.ifs.somtoolbox.layers.UnitPair
 
getFirstNLabels(int, ArrayList<InputNameDistance>) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getFixedWidth() - Method in class at.tuwien.ifs.somtoolbox.util.JMultiLineToolTip
 
getFlatDefaultList() - Method in class at.tuwien.ifs.commons.gui.jsap.OptionEditor
 
getFont() - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
Gets the current font of this label.
getFont(double) - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
Gets a scaled version of the current font.
getFont() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PaletteDisplayer
Returns the font used for the scale.
getFontSize() - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
Gets the current font size of this label.
getFontSize(double) - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
Gets scaled value of the current font size of this label.
getFormatName() - Static method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getFormatName() - Static method in class at.tuwien.ifs.somtoolbox.data.ARFFFormatInputData
 
getFormatName() - Static method in class at.tuwien.ifs.somtoolbox.data.ESOMInputData
 
getFormatName() - Static method in class at.tuwien.ifs.somtoolbox.data.MarsyasARFFInputData
 
getFormatName() - Static method in class at.tuwien.ifs.somtoolbox.data.RandomAccessFileSOMLibInputData
 
getFormatName() - Static method in class at.tuwien.ifs.somtoolbox.data.SimpleMatrixInputData
 
getFormatName() - Static method in class at.tuwien.ifs.somtoolbox.data.SOMPAKInputData
 
getFormatName() - Static method in class at.tuwien.ifs.somtoolbox.input.ESOMFormatInputReader
 
getFormatName() - Static method in class at.tuwien.ifs.somtoolbox.input.SOMLibFormatInputReader
 
getFormatName() - Static method in class at.tuwien.ifs.somtoolbox.input.SOMPAKFormatInputReader
 
getFunctionValues(int) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.TopographicFunction
 
getFurthestMember() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticClass
calculates the point with the most distance to the class centre
getGateWeights() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
 
getGeneralUnitPNodeAtPos(Point2D) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getGeneralUnitPNodeAtPos(double, double) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getGeneralUnitPNodeAtPos(float, float) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getGHSOM() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.GHSOMTestRunResult
returns a GHSOM representing the SOM trained in this run
getGradient() - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
getGradientColor(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ColorGradient
 
getGradientPoint(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ColorGradient
 
getGrid() - Method in class at.tuwien.ifs.somtoolbox.visualization.Snapper3D
 
getGridLayout() - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getGridLayout() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getGridLayout() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getGridLayout() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getGridLayout() - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
 
getGridLayout() - Method in class at.tuwien.ifs.somtoolbox.properties.SOMProperties
 
getGridTopology() - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getGridTopology() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getGridTopology() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getGridTopology() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getGridTopology() - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
 
getGridTopology() - Method in class at.tuwien.ifs.somtoolbox.properties.SOMProperties
 
getGrowingSOM() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the SOM learned within the run this object represents
getGsom() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getHeaderPane() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.RunResultSpecifierPane
creates and returns the header Panel (the one with the header text and the remove Button
getHeight() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
Return the map height in pixels, i.e.
getHeight() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
get/set Height/Width/X/Y: used for the bounding rectangle of the cluster.
getHorizontalTitleAlignment() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
getHorizontalTitleTextPosition() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
getHtmlMapTemplatesDir() - Method in class at.tuwien.ifs.somtoolbox.properties.SOMViewerProperties
 
getHTMLVisualisationControl(Map) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
 
getHTMLVisualisationControl(Map) - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
Returns HTML control elements (inputs) to be used by the webserver version of the SOM.
getHTMLVisualisationControl(Map) - Method in class at.tuwien.ifs.somtoolbox.visualization.SmoothedDataHistograms
 
getIcon() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
getIcon(String) - Static method in class at.tuwien.ifs.somtoolbox.util.UiUtils
 
getIcon(String, String) - Static method in class at.tuwien.ifs.somtoolbox.util.UiUtils
 
getIconHeight() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel.TitleRow.PlaceholderIcon
 
getIconTitleGap() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
getIconWidth() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel.TitleRow.PlaceholderIcon
 
getID() - Method in class at.tuwien.ifs.somtoolbox.data.metadata.AbstractVectorMetaData
Return the unique ID of the Vector.
getID() - Method in class at.tuwien.ifs.somtoolbox.data.metadata.AudioVectorMetaData
 
getID() - Method in class at.tuwien.ifs.somtoolbox.data.metadata.EmtpyVectorMetaData
 
getId() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.InputVectorSelectorPane
returns the id of this vector (that is its index in all lists and the input file
getIdentifier() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns the ID of the layer.
getIdString() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getIdString() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getIdString() - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the identification string of the map layer.
getImage() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.RhythmPattern
 
getImageMap() - Method in class at.tuwien.ifs.somtoolbox.apps.server.HTMLMapInformation
 
getImagePath() - Method in class at.tuwien.ifs.somtoolbox.apps.server.HTMLMapInformation
 
getIndex(String) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibTemplateVector
 
getIndex() - Method in class at.tuwien.ifs.somtoolbox.data.TemplateVectorElement
 
getIndex(String) - Method in class at.tuwien.ifs.somtoolbox.input.InputCorrections
 
getIndex() - Method in class at.tuwien.ifs.somtoolbox.structures.ElementWithIndex
 
getIndex() - Method in class at.tuwien.ifs.somtoolbox.util.comparables.ComponentRegionCount
 
getIndexOf(String) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
getIndexOfClosestCluster(double[]) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
Get the index of the closest cluster for the given instance index.
getIndexOfFeature(String) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibTemplateVector
 
getIndexOfFeature(String) - Method in interface at.tuwien.ifs.somtoolbox.data.TemplateVector
Returns the numerical index of the feature with the given name.
getIndexofFileName(String) - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.NavigationPanel
 
getIndexOfLineClosestToMean(Cluster<? extends ComponentLine2D>) - Method in class at.tuwien.ifs.somtoolbox.clustering.functions.ComponentLine2DDistance
 
getIndexOfLineClosestToMean(Cluster<? extends ComponentLine3D>) - Method in class at.tuwien.ifs.somtoolbox.clustering.functions.ComponentLine3DDistance
 
getIndexOfLineClosestToMean(Cluster<? extends DoubleVector2D>) - Method in class at.tuwien.ifs.somtoolbox.clustering.functions.DoubleVector2DDistance
 
getIndexOfMaxValue(int...) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
Gets the index of the max value in an array.
getIndexOfMaxValue(double...) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
Deprecated. not used anymore, marked for removal
getIndexOfValue(double[], double, int) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
get the index of a given value in an array and skip the given number of indices to avoid duplicate indices in the results, i.e.
getIndexOfValue(int[], int) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
get the index of a given value in an array
getIndices(List<HierarchicalCluster<E>>) - Method in class at.tuwien.ifs.somtoolbox.clustering.WardClustering
find matrix indices for starting & ending the symmetrical matrix indices
getIndices() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.Cluster
 
getIndicesOfMaxValues(double[], int) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
get the max indices of the numberOfIndices largest values in an array
getIndicesOfMaxValues(int[], int) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
get the max indices of the numberOfIndices largest values in an array
getIndicesOfMaxValues(double[], double) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
get the indices of the numberOfIndices largest values in an array
getIndicesOfMaxValuesOLD(int[], int) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
Deprecated. FIXME this is not working marked for removal
getInitalizationDuration() - Static method in class at.tuwien.ifs.somtoolbox.apps.initEval.Measure
 
getInitialMinESS(List<HierarchicalCluster<E>>) - Method in class at.tuwien.ifs.somtoolbox.clustering.WardClustering
 
getInput(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.InputQEContainer
return the input datum at the specified index
getInput() - Method in class at.tuwien.ifs.somtoolbox.util.comparables.InputDistance
 
getInputCoords(InputQEContainer) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.output.SOMDescriptionHTML
formats a list of input vectors for use in the quantization error list the created format is: "on input vector(s) "id" on unit at[x,y], "id2" on unit at [x2,y2],...
getInputCoords(InputQEContainer) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.output.SOMDescriptionLATEX
formats a list of input vectors for use in the quantization error list the created format is: "on input vector(s) "id" on unit at[x,y], "id2" on unit at [x2,y2],...
getInputCorrections() - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
getInputCorrections() - Method in class at.tuwien.ifs.somtoolbox.input.InputCorrections
 
getInputCorrectionsPNode() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getInputData() - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PlaylistAnalysis
 
getInputData() - Static method in class at.tuwien.ifs.somtoolbox.apps.initEval.Measure
 
getInputData() - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
getInputData(FileProperties) - Static method in class at.tuwien.ifs.somtoolbox.models.AbstractNetworkModel
 
getInputData() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the InputData object storing information about the input data used for training the som.
getInputDataFilename() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the complete filename of the file containing the input data complete filename means including the path.
getInputDatum(String) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getInputDatum(String[]) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getInputDatum(int) - Method in class at.tuwien.ifs.somtoolbox.data.DataBaseSOMLibSparseInputData
 
getInputDatum(int) - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Get an input datum with a specified index.
getInputDatum(String) - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Get an input datum with a specified label.
getInputDatum(String[]) - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Returns an array of input data with the specified labels.
getInputDatum(int) - Method in class at.tuwien.ifs.somtoolbox.data.RandomAccessFileSOMLibInputData
 
getInputDatum(int) - Method in class at.tuwien.ifs.somtoolbox.data.SimpleMatrixInputData
 
getInputDatum(int) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibSparseInputData
 
getInputDatum(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the InputDatum labelled with the specified name
getInputDatum(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the InputDatum at the specified index
getInputDatumIndex(String) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getInputDirectoryParser() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.AbstractOptionFactory
 
getInputFileParser() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.AbstractOptionFactory
 
getInputFileParser(String...) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.AbstractOptionFactory
 
getInputIndex(String) - Method in class at.tuwien.ifs.somtoolbox.layers.InputContainer
Finds the index for a given input name.
getInputLabel(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.InputQEContainer
returns the label for the input at the given index
getInputLabelDetails(InputDatum) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.InputVectorSelectorPane
 
getInputLabels() - Method in class at.tuwien.ifs.somtoolbox.data.distance.InputVectorDistanceMatrix
 
getInputLabelsofClass(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns a list of labels of all input items belonging to the given class
getInputMappedQE(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
calculates the qe for the specified input vector Calculates the quantization error of the input vector specified by its name, that is the distance of the given input vector to the unit it is mapped to.
getInputObjects() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getInputReader() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns an instance of input reader the following files are handed to the reader: this.weightFilePath, this.unitFilePath, this.mapFilePath the reader created is saved in this.inputReader
getInputStream(String, String) - Static method in class at.tuwien.ifs.somtoolbox.util.FileUtils
 
getInputStream(String, File) - Static method in class at.tuwien.ifs.somtoolbox.util.FileUtils
 
getInputVector(int) - Method in class at.tuwien.ifs.somtoolbox.data.DataBaseSOMLibSparseInputData
 
getInputVector(int) - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Get the vector for the input datum of the specified index
getInputVector(int) - Method in class at.tuwien.ifs.somtoolbox.data.RandomAccessFileSOMLibInputData
 
getInputVector(int) - Method in class at.tuwien.ifs.somtoolbox.data.SimpleMatrixInputData
 
getInputVector(int) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibSparseInputData
 
getInputVector(String, SOMLibTemplateVector) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getInputVectorDistanceMatrix() - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
getInputVectorPath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
getInputWinnerQE(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
calculates the qe for the specified input vector Calculates the quantization error of the input vector specified by its name, that is the distance of the given input vector to the winner unit on the som.
getInsertionTopologicalNeighbors(GrowingCellUnit, GrowingCellUnit) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getInsertQuery(String, String[], Object[]) - Method in class at.tuwien.ifs.somtoolbox.database.DBConnector
 
getInsertQuery(String, String, Object) - Method in class at.tuwien.ifs.somtoolbox.database.DBConnector
 
getInsertQuery(String, String, String) - Method in class at.tuwien.ifs.somtoolbox.database.DBConnector
 
getInstance() - Static method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
getInstance() - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.CommonSOMViewerStateData
 
getInstance() - Static method in class at.tuwien.ifs.somtoolbox.util.ProgressListenerFactory
 
getInstanceIndexWithMaxSSE(double[][]) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.Cluster
Get the instance with the maximum SSE of all instances assigned to this cluster.
getInstances(double[][]) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.Cluster
Returns all the instances belonging to this cluster according to the given data set.
getIntegerFormat(int) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
Returns a DecimalFormat intended to formatting integers with the given number of digits, potentially with leading zeros
getInteractionMapKey(String, String, Point) - Method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
getInternalDataRepresentationCopy() - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
 
getIntersectionDirections(ArrayList) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticClass
Returns an ArrayList containing directions of the Units given in the ArrayList, measured to the Center of the Class
getItemListener() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractSelectionPanel
 
getJCheckBox() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.InputVectorSelectorPane
This method initializes jCheckBox
getJContentPane() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
Create the main panel
getJLabel() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.MnemonicSOMSettingsPanel
This method initializes jLabel
getKaskiGateLabels() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
 
getKaskiGateUnitLabels(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getKaskiGateUnitLabels(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getKaskiGateUnitLabels(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getKaskiGateUnitLabels(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getKaskiGateUnitLabelsWgt(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getKaskiGateUnitLabelsWgt(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getKaskiGateUnitLabelsWgt(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getKaskiGateUnitLabelsWgt(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getKaskiLabels() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
 
getKaskiUnitLabels(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getKaskiUnitLabels(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getKaskiUnitLabels(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getKaskiUnitLabels(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getKaskiUnitLabelsWgt(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getKaskiUnitLabelsWgt(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getKaskiUnitLabelsWgt(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getKaskiUnitLabelsWgt(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getLabel() - Method in class at.tuwien.ifs.commons.gui.jsap.ParameterControl
 
getLabel() - Method in class at.tuwien.ifs.commons.gui.jsap.SwitchControl
 
getLabel() - Method in class at.tuwien.ifs.somtoolbox.clustering.Cluster
 
getLabel(int) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getLabel(int) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibTemplateVector
 
getLabel(int) - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Return the label of the input vector at the given index.
getLabel() - Method in class at.tuwien.ifs.somtoolbox.data.InputDatum
Returns the label of the InputDatum.
getLabel(int) - Method in interface at.tuwien.ifs.somtoolbox.data.TemplateVector
Gets the label at the given index.
getLabel() - Method in class at.tuwien.ifs.somtoolbox.data.TemplateVectorElement
Gets the label.
getLabel() - Method in class at.tuwien.ifs.somtoolbox.input.InputCorrections.InputCorrection
 
getLabel() - Method in class at.tuwien.ifs.somtoolbox.structures.ElementWithIndex
 
getLabel() - Method in class at.tuwien.ifs.somtoolbox.util.comparables.InputNameDistance
 
getLabel() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.Shift
 
getLabel() - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Node
 
getLabelColor() - Method in class at.tuwien.ifs.somtoolbox.apps.UnitFileViewer
 
getLabelCoordinates(GrowingSOM) - Static method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
getLabelNode() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
 
getLabels(String) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
getLabels() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getLabels() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibTemplateVector
 
getLabels() - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Returns an array containing the labels of all the input data.
getLabels() - Method in interface at.tuwien.ifs.somtoolbox.data.TemplateVector
Gets all the labels defined in this template vector.
getLabels() - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
 
getLabels(String) - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Returns an array of labels or null, if no labels are assigned to this unit.
getLabels() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
 
getLabels() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
returns current label or null in case label is not set
getLabels(double, boolean) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
calculates and sets the current labels in case label is not set yet or the values have changed and returns it
getLabelsAsList() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibTemplateVector
 
getLabelsAsList() - Method in interface at.tuwien.ifs.somtoolbox.data.TemplateVector
Gets all the labels defined in this template vector as a list.
getLatexRGBString(int[]) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
creates an representation of a color that can be used in html or css takes an int - array of size 3 and transforms it to a hex String of structure #rrggbb The array must have at least length 3 and must not contain null values.
getLayer() - Static method in class at.tuwien.ifs.somtoolbox.apps.initEval.Measure
 
getLayer() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Returns the layer of units this unit is part of.
getLayer() - Method in class at.tuwien.ifs.somtoolbox.models.GrowingCellStructures
 
getLayer() - Method in class at.tuwien.ifs.somtoolbox.models.GrowingSOM
Returns the actual map layer.
getLayout() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
getLeftNode() - Method in class at.tuwien.ifs.somtoolbox.clustering.HierarchicalCluster
 
getLegendColor(int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.PieChartPNode
Returns the colour used in the diagram at the specified index.
getLegendColors() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.PieChartPNode
Returns the colors used in the diagram.
getlength() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AutoRoutePanel.SimpleTSPSolver.Tour
compute the length of the path
getLength() - Method in class at.tuwien.ifs.somtoolbox.structures.ComponentLine2D
 
getLength() - Method in class at.tuwien.ifs.somtoolbox.structures.ComponentLine3D
 
getLength() - Method in class at.tuwien.ifs.somtoolbox.structures.DoubleVector2D
 
getLength() - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.Segment
 
getLevel() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getLevel() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getLevel() - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the level of the map layer in a hierarchical model.
getLevel(int) - Method in class at.tuwien.ifs.somtoolbox.models.GHSOMHierarchyRoot
returns the levelLayer of level
getLevel() - Method in class at.tuwien.ifs.somtoolbox.models.GHSOMLevelLayer
 
getLevel() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
in which level of the clustering tree is this node (1 = top node)
getLevelLayer() - Method in class at.tuwien.ifs.somtoolbox.models.GHSOMLevelLayer
 
getLinearArray(int) - Static method in class at.tuwien.ifs.somtoolbox.util.ArrayUtils
Initialises an array of the given size, with the value at each index corresponding to the index, i.e.
getLinearPercentageArray() - Static method in class at.tuwien.ifs.somtoolbox.util.ArrayUtils
create a double[] which contains percentage values, i.e.
getLinePos(double, double, Point2D.Double) - Method in class at.tuwien.ifs.somtoolbox.visualization.FuzzyColourCodingVisualiser
 
getLineSelectionEventHandler() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MyPCanvas
 
getLinkageMap() - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
getLinksuffix() - Method in class at.tuwien.ifs.somtoolbox.output.HTMLOutputter
 
getListCellRendererComponent(JList, Object, int, boolean, boolean) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList.PlayListCellRenderer
 
getListener() - Method in class at.tuwien.ifs.somtoolbox.util.ProgressListenerFactory
 
getLocations() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
getLocationScores() - Method in class at.tuwien.ifs.somtoolbox.summarisation.methods.LocationMethod
 
getLog2(double) - Static method in class at.tuwien.ifs.somtoolbox.layers.quality.EntropyAndPurityCalculator
 
getLongDescription() - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
getLongestName() - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
getLongestStringLength() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibTemplateVector
 
getLongestStringLength() - Method in interface at.tuwien.ifs.somtoolbox.data.TemplateVector
calculates the length of the longest feature/attribute label
getLongestStringLength(Iterable<String>) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
 
getLongestStringLength(String[]) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
 
getMain() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes main
getMainPanel() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes mainPanel
getManualLabels() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getMap() - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PlaylistAnalysis
 
getMap() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
 
getMap() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
getMapDescriptionFileName() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
getMapDescriptionFileName() - Method in class at.tuwien.ifs.somtoolbox.input.ESOMFormatInputReader
 
getMapDescriptionFileName() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the name of the map description file, or null if not loaded.
getMapDescriptionFileName() - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibFormatInputReader
 
getMapDescriptionFileName() - Method in class at.tuwien.ifs.somtoolbox.input.SOMPAKFormatInputReader
 
getMapDescriptionFileName(String, String, String, boolean) - Static method in class at.tuwien.ifs.somtoolbox.output.SOMLibMapOutputter
 
getMapDetailPanel() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.CommonSOMViewerStateData
 
getMapDistance(int, int, int, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getMapDistance(Unit, Unit) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getMapDistance(int, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getMapDistance(int, int, int, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getMapDistance(Unit, Unit) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getMapDistance(int, int, int, int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the distance between two units on the map grid.
getMapDistance(Unit, Unit) - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the distance between two units on the map grid.
getMapDistance(int, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.MnemonicGrowingLayer
 
getMapDistance(int, int, int, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.MnemonicGrowingLayer
 
getMapDistance(int, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.ToroidLayer
Toroid distance on the map
getMapDistance(int, int, int, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.ToroidLayer
 
getMapDistanceSq(int, int, int, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getMapDistanceSq(Unit, Unit) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getMapDistanceSq(int, int, int, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.ToroidLayer
 
getMapFilePath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.RunResultSpecifierPane
 
getMapFilePath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getMapIdString() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Returns the map identification string of this unit's layer.
getMapKey(String, Palette, int, int, int, boolean, boolean) - Method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
getMapLevel() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Returns the level of this unit's layer in a hierarchy of maps.
getMapMMQE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the mmqe of the trained SOM returns the mmqe of the trained SOM, as specified by the QuantizationError Object - see there for more information
getMapMQE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the mqe of the trained SOM returns the mqe of the trained SOM, as specified by the QuantizationError Object - see there for more information
getMapPane() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.RunResultSpecifierPane
creates and returns the Panel that contains the Values for specifying the location of the .map file
getMapPath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
getMappedDataNames() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
getMappedInputDistance(int) - Method in class at.tuwien.ifs.somtoolbox.layers.InputContainer
Returns the distance between this unit's weight vector and the vector of the mapped input data at the specified index.
getMappedInputDistance(String) - Method in class at.tuwien.ifs.somtoolbox.layers.InputContainer
 
getMappedInputDistances() - Method in class at.tuwien.ifs.somtoolbox.layers.InputContainer
Returns an array of distances between this unit's weight vector and the vectors of the mapped input data.
getMappedInputDistances() - Method in class at.tuwien.ifs.somtoolbox.layers.MappedInputs
Returns an array of distances between this unit's weight vector and the vectors of the mapped input data.
getMappedInputName(int) - Method in class at.tuwien.ifs.somtoolbox.layers.InputContainer
Returns the name identifier of the mapped input data at the specified index.
getMappedInputNames() - Method in class at.tuwien.ifs.somtoolbox.layers.InputContainer
Returns an array of strings containing the identifiers of the mapped input data.
getMappedInputNames() - Method in class at.tuwien.ifs.somtoolbox.layers.MappedInputs
Returns an array of strings containing the identifiers of the mapped input data.
getMappedInputNamesAsList() - Method in class at.tuwien.ifs.somtoolbox.layers.InputContainer
 
getMappedSOM() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Returns the map assigned to this unit or null otherwise.
getMappedUnit(double[]) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
mappes the vector to the current SOM and returns x and y coordinates of the winning unit.
getMappedVecs(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getMappedVecs(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getMappedVecs(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.MnemonicSOMLibFormatInputReader
 
getMappedVecs(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns an array of strings containing the names of vectors mapped onto a certain unit specified by coordinates x and y.
getMappedVecs(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns an array of strings containing the names of vectors mapped onto a certain unit specified by coordinates x and y.
getMappedVecsDist(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getMappedVecsDist(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getMappedVecsDist(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.MnemonicSOMLibFormatInputReader
 
getMappedVecsDist(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns an array of double values containing the distances between mapped vectors and the unit specified by coordinates x and y.
getMappedVecsDist(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns an array of double values containing the distances between mapped vectors and the unit specified by coordinates x and y.
getMapPNode() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
getMapProperty(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getMapQualities(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
Returns the map qualities of the given quality measure
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.EntropyMeasure
 
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.IntrinsicDistance
 
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.InversionMeasure
 
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.MetricMultiScaling
 
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.PseudoSilhouetteValue
 
getMapQuality(String) - Method in interface at.tuwien.ifs.somtoolbox.layers.quality.QualityMeasure
 
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.QuantizationError
 
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.SammonMeasure
 
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.SilhouetteValue
 
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.SOMDistortion
 
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.SOMSilhouetteValue
 
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.SpearmanCoefficient
 
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.TopographicError
 
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.TopographicProduct
 
getMapQuality(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.Trustworthiness_NeighborhoodPreservation
 
getMapQualityDescriptions() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.AbstractQualityMeasure
 
getMapQualityDescriptions() - Method in interface at.tuwien.ifs.somtoolbox.layers.quality.QualityMeasure
 
getMapQualityNames() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.AbstractQualityMeasure
 
getMapQualityNames() - Method in interface at.tuwien.ifs.somtoolbox.layers.quality.QualityMeasure
 
getMapSelectionKey(String, Palette, String) - Method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
getMapSilouette() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the silhouette value of the map (using quality measure "silhouette")
getMapTE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the topographic error of the map (using quality measure "TE_Map")
getMapUnit(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.InputQEContainer
returns the unit at the specified index
getMapXSize() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Returns the width of this unit's map.
getMapYSize() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Returns the height of this unit's map.
getMapZSize() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Returns the depth of this unit's map.
getMarkerPos(double, double, int, int, Point2D.Double) - Method in class at.tuwien.ifs.somtoolbox.visualization.FuzzyColourCodingVisualiser
 
getMatrix() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.RhythmPattern
 
getMatrixIndex(int, int) - Method in class at.tuwien.ifs.somtoolbox.data.distance.LeightWeightMemoryInputVectorDistanceMatrix
 
getMax() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.SOMSilhouetteValue
 
getMAXCompactness() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
getMaxCount() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
Compare two SOMs according to where input vectors come to lie on the map
getMaxDistance() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
getMaxEErrorRegionNames() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
Returns the maximum Entropy Error Region's classnames
getMaximumClassifiedRegionValue(Unit[], String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
Returns the maximum of the selected classified Region
getMaximumEdgeWeight() - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Graph
 
getMaximumEEClassIndex() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
Returns the class with the maximum EntropyError
getMaximumEntropy() - Method in class at.tuwien.ifs.somtoolbox.visualization.EntropyVisualizer
returns the maximum entropy regions value as double;F
getMaximumEntropyRegion() - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.RegionManager
Goes through all the Regions and returns the Region with smallest Entropy Error.
getMaximumEntropyRegionNames() - Method in class at.tuwien.ifs.somtoolbox.visualization.EntropyVisualizer
returns the Maximum Entropy Region's Class Names
getMaximumMatrixValue() - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractMatrixVisualizer
 
getMaximumSize(JComponent) - Method in class at.tuwien.ifs.somtoolbox.util.MultiLineToolTipUI
 
getMaximumTermFrequency() - Method in class at.tuwien.ifs.somtoolbox.data.TemplateVectorElement
Gets the maximum tf.
getMaxInputMappedQE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the max qe of any input item compared with the unit it is mapped to returns the value of the greatest distance between the weight vector of an input item and the unit this item is mapped to.
getMaxInputWinnerQE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the max qe of any input item compared with all units on the map returns the value of the greatest distance between the weight vector of an input item and alle the weight vectors of units on the map.
getMaxNrDataNames(int[][], int, int) - Static method in class at.tuwien.ifs.somtoolbox.output.TrajectoryOutputter
 
getMaxNumberOfMappedElements(SOMLibFormatInputReader) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.PocketSOMFormatUtils
get the max number of mapped instances of a unit for the given map
getMaxNumberOfMappedElements(GrowingLayer) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.PocketSOMFormatUtils
Gets the max number of mapped instances of a unit for the GrowingLayer.
getMaxPrediction() - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibRegressInformation
 
getMaxRegionValue(ArrayList[], Integer[]) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
Returns the MAX Value of the Region (Region values need to be summed and cast into the array at the specific Region index)
getMaxUnit(String, Unit[]) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
returns the maximal Value of the quality measure with "Name"as identifier
getMaxUnitMQE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the biggest mean quantization error of all units where at least one input vector is mapped on.
getMaxUnitQE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the biggest quantization error of all units where at least one input vector is mapped on
getMaxUnitTE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the maximal topographic error of any unit on the map (together with the unit)
getMaxUsableScreenSize() - Static method in class at.tuwien.ifs.somtoolbox.util.UiUtils
 
getMaxValue(int...) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
Gets the index of the max value in an array.
getMaxValues() - Method in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
getMaxValues() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
 
getMDSType() - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.MultiDocumentSummarisationPanel
 
getMeanClassSpread() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
Returns the mean Class spread of all Classes in Units;
getMeanPrediction() - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibRegressInformation
 
getMeanTermFrequency() - Method in class at.tuwien.ifs.somtoolbox.data.TemplateVectorElement
Gets the mean tf.
getMeanVector() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getMeanVector(String[]) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getMeanVector() - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Gets the mean vector of the input vectors.
getMeanVector(String[]) - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Returns mean vector of specified vectors provided by String[] array.
getMeanVector() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
Returns the mean vector of the cluster's weight vectors.
getMergeCost() - Method in class at.tuwien.ifs.somtoolbox.clustering.HierarchicalCluster
 
getMergeCost() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
 
getMergeCostIncrease() - Method in class at.tuwien.ifs.somtoolbox.clustering.HierarchicalCluster
 
getMessage() - Method in class at.tuwien.ifs.somtoolbox.util.StdErrProgressWriter
 
getMessageFromException(Exception) - Method in class at.tuwien.ifs.somtoolbox.data.SOMVisualisationData
 
getMetric() - Method in class at.tuwien.ifs.somtoolbox.data.distance.InputVectorDistanceMatrix
 
getMetric() - Method in class at.tuwien.ifs.somtoolbox.data.distance.RandomAccessFileInputVectorDistanceMatrix
 
getMetric() - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
 
getMetric() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getMetric() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Calculates and returns the mean quantization error of the map based on the quantization errors of the single units.
getMetric() - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the metric used for distance calculation.
getMetricName() - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getMetricName() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the name of the metric used for distance calculation.
getMetroMapComponents() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
getMiddlePoint(double[], double[]) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PathMerger
 
getMiddlePoint(Point2D, Point2D) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PathMerger
Get the middle point between the Points.
getMidPoint() - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.Segment
 
getMin() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.SOMSilhouetteValue
 
getMinAbsoluteCount() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
getMINCompactness() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
getMinimumClassifiedRegionValue(Unit[], String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
Returns the minimum of the selected classified Region
getMinimumEdgeWeight() - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Graph
 
getMinimumEntropy() - Method in class at.tuwien.ifs.somtoolbox.visualization.EntropyVisualizer
returns the minimum entropy regions value as double;
getMinimumEntropyRegion() - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.RegionManager
Goes through all the Regions and returns the Region with biggest Entropy Error.
getMinimumFeatureDensity() - Method in class at.tuwien.ifs.somtoolbox.properties.SOMProperties
 
getMinimumMatrixValue() - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractMatrixVisualizer
 
getMinimumSize() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel.TitleRow
 
getMinimumSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.GHSOMNavigationPanel
 
getMinimumSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.MapDetailPanel
 
getMinimumSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ControlFrame
 
getMinimumSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.MultichannelPlaybackPanel
 
getMinimumSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PaletteDisplayer
 
getMinimumSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlaySOMPlayer
 
getMinimumSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PlaySOMPanel
 
getMinimumSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.QuerySOMPanel
 
getMinimumSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ShiftsControlPanel
 
getMinimumSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.VisualizationControl
 
getMinimumSize() - Method in class at.tuwien.ifs.somtoolbox.util.mnemonic.MapPanel
 
getMinimumSize(JComponent) - Method in class at.tuwien.ifs.somtoolbox.util.MultiLineToolTipUI
 
getMinimumSize() - Method in class at.tuwien.ifs.somtoolbox.visualization.ActivityHistogram.ActivityHistrogramControlPanel
 
getMinimumSize() - Method in class at.tuwien.ifs.somtoolbox.visualization.ComparisonVisualizer.ComparisonControlPanel
 
getMinimumSpanningTree() - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Graph
 
getMinimumTermFrequency() - Method in class at.tuwien.ifs.somtoolbox.data.TemplateVectorElement
Gets the minimum tf.
getMinInputMappedQE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the min qe of any input item compared with the unit it is mapped to returns the value of the smallest distance between the weight vector of an input item and the unit this item is mapped to.
getMinInputWinnerQE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the min qe of any input item compared with all units on the map returns the value of the smallest distance between the weight vector of an input item and alle the weight vectors of units on the map.
getMinMaxNormalisedClusterCentroids() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
Get a double[][] of all cluster centroids.
getMinMaxNormalisedClusterCentroidsWithin() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
Get a double[][] of all cluster centroids.
getMinPrediction() - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibRegressInformation
 
getMinRank() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.Trustworthiness_NeighborhoodPreservation.DistanceTag
 
getMinUnit(String, Unit[]) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
returns the minimal Value of the quality measure with "Name"as identifier
getMinUnitMQE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the smallest mean quantization error of all units where at least one input vector is mapped on.
getMinUnitQE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the smallest quantization error of all units where at least one input vector is mapped on
getMinUnitSilouette() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the minimal silhouette Value of any unit on the map (together with the unit)
getMinUnitTE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the minimal topographic error (> 0!!) of any unit on the map (together with the unit)
getMinValues() - Method in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
getMinValues() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
 
getMixerCount() - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.LineListModel
 
getModel() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ColourLegendTable
Deprecated.  
getMostDissimilarNeighbor(Unit) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns the neighboring unit of a unit specified by argument u with the most distant weight vector.
getMQEForUnit(int, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returs the mean quantization error for the unit with the specified coordinates the mqe of a unit = sum or qe errors / number of input items mapped to this unit.
getMultiResultDocs() - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.ResultHandler
 
getMultiResultFilenames() - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.ResultHandler
 
getMultiResultScores() - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.ResultHandler
 
getMyRectangleSelectionEventHandler() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MyPCanvas
 
getName() - Method in class at.tuwien.ifs.somtoolbox.apps.helper.DataSetGenerator.DataPoint
 
getName() - Method in class at.tuwien.ifs.somtoolbox.layers.Label
Returns the name of the label.
getName() - Method in class at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizerInstance
 
getName() - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
getNameAndScaledValue(int) - Method in class at.tuwien.ifs.somtoolbox.layers.Label
 
getNamedDistances(int) - Method in class at.tuwien.ifs.somtoolbox.data.distance.FullMemoryInputVectorDistanceMatrix
 
getNameOfClass(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the name of the class specified by the index
getNearestN(int, DistanceMetric, int) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
Returns the n nearest input vectors for the index of the given vector of the dataset.
getNearestN(double[], DistanceMetric, int) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
Retrieves the given number of InputDatum that are closest to the given vector.
getNearestNUnsorted(int, DistanceMetric, int) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getNeighbourhoodFunction() - Method in class at.tuwien.ifs.somtoolbox.input.SOMPAKFormatInputReader
 
getNeighbouringUnits(Unit) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Get direct neighbours of the given unit.
getNeighbouringUnits(int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getNeighbouringUnits(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getNeighbouringUnits(Unit, double) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Convenience method for GrowingLayer.getNeighbouringUnits(int, int, int, double)
getNeighbouringUnits(int, int, double) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Convenience method for GrowingLayer.getNeighbouringUnits(int, int, int, double)
getNeighbouringUnits(int, int, int, double) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Gets neighbours within a certain radius; uses GrowingLayer.getMapDistance(int, int, int, int, int, int) for map distance computation
getNeighbouringUnits(Unit) - Method in class at.tuwien.ifs.somtoolbox.layers.ToroidLayer
 
getNeighbouringUnits(Unit, double) - Method in class at.tuwien.ifs.somtoolbox.layers.ToroidLayer
 
getNeighbouringUnits(Point2D) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
Finds the four units around the given point.
getNeighbouringUnits(Point2D) - Method in class at.tuwien.ifs.somtoolbox.visualization.Snapper2D
Finds the four units around the given point.
getNeighbouringUnits(Point3d) - Method in class at.tuwien.ifs.somtoolbox.visualization.Snapper3D
 
getNeighbours(int, int, Unit[][]) - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Graph
 
getNeighbours(int, int, Unit[][]) - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.InputdataGraph
 
getNeighbours(int, int, Unit[][]) - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.SomGraph
 
getNextCoords(Point2D, int[]) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
return the coordinates on the som grid for the next unit in the given direction
getNextIndex() - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.RndIndexGenerator
 
getNextSong(int, boolean) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.PlaybackThread
 
getNextSong(int, boolean) - Method in class at.tuwien.ifs.somtoolbox.audio.PlaybackThread
 
getNextValidPoint(Point2D[], int) - Static method in class at.tuwien.ifs.somtoolbox.clustering.functions.ComponentLine2DDistance
 
getNextValidPoint(Point3d[], int) - Static method in class at.tuwien.ifs.somtoolbox.clustering.functions.ComponentLine3DDistance
 
getNNearest() - Method in class at.tuwien.ifs.somtoolbox.apps.server.HTMLMapInformation
 
getNNearest(ArrayList<InputDistance>) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getNNearest(int, ArrayList<InputDistance>) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getNNearest(int, int) - Method in class at.tuwien.ifs.somtoolbox.data.distance.InputVectorDistanceMatrix
Return the n nearest vectors of input x.
getNNearestInputs(String, int, InputData) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getNNearestInputs(Unit, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getNO_CPUS() - Static method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getNode(int[]) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
returns the Semantic Node for given coordinates.
getNode(int[]) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
returns the Semantic Node for given coordinates
getNode(String) - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Graph
 
getNodeCount() - Method in class at.tuwien.ifs.somtoolbox.util.mnemonic.MapPanel
 
getNodes() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
Returns all the GeneralUnitPNodes contained in this cluster
getNodesAtLevel(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusteringTree
 
getNonEmptyUnits() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
Returns an array containing nonempty units
FIXME: refactor this, make a method in GrowingLayer, based on GrowingLayer.getNumberOfNotEmptyUnits()
getNorthPanel() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes northPanel
getNrBestContext(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrBestContext(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrBestContext(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getNrBestContext(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getNrContextGateLabels(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrContextGateLabels(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrContextGateLabels(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getNrContextGateLabels(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getNrDataNames(GrowingSOM, String[]) - Static method in class at.tuwien.ifs.somtoolbox.output.TrajectoryOutputter
 
getNrGateWeights(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrGateWeights(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrGateWeights(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getNrGateWeights(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getNrKaskiGateLabels(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrKaskiGateLabels(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrKaskiGateLabels(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getNrKaskiGateLabels(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getNrKaskiLabels(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrKaskiLabels(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrKaskiLabels(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getNrKaskiLabels(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getNrKaskiWeights(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrKaskiWeights(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrKaskiWeights(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getNrKaskiWeights(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
 
getNrSomsMapped(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrSomsMapped(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrSomsMapped(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the number of subordinate maps of a certain unit specified by coordinates x and y.
getNrSomsMapped(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the number of subordinate maps of a certain unit specified by coordinates x and y.
getNrUnitLabels(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrUnitLabels(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrUnitLabels(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the number of labels of a certain unit specified by coordinates x and y.
getNrUnitLabels(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the number of labels of a certain unit specified by coordinates x and y.
getNrVecMapped(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrVecMapped(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getNrVecMapped(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.MnemonicSOMLibFormatInputReader
 
getNrVecMapped(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the number of vectors mapped onto a certain unit specified by coordinates x and y.
getNrVecMapped(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the number of vectors mapped onto a certain unit specified by coordinates x and y.
getNumberOfAttributeOccurrences(double[][]) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.Cluster
Get the numbers of occurrences of each attribute in this cluster.
getNumberOfAttributeTypes() - Method in class at.tuwien.ifs.somtoolbox.visualization.RhythmPatternsAttributeVisualizer
 
getNumberOfClasses() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the number of classes.
getNumberofClasses() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getNumberOfClassifiedUnits(String, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
Computes the number of classified units for the given class and identifier
getNumberOfClassMembers(int) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
Gets the number of input vectors in the given class.
getNumberOfClassmembers(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the number of input elements belonging to the given class if no class information is attached to this input, -1 is returned
getNumberOfColours() - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
getNumberOfGradientColours() - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
getNumberOfInputs() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
Returns the number of input vectors inside this cluster
getNumberOfInputsOnUnit(int, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getNumberOfInputVectors() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the number of input vectors used for training the SOM, that is the number of different vectors present in the input file for the SOM training.
getNumberOfInstances() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.Cluster
 
getNumberOfMappedInputs() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getNumberOfMappedInputs() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getNumberOfMappedInputs() - Method in class at.tuwien.ifs.somtoolbox.layers.InputContainer
Returns the number of mapped input data.
getNumberOfMappedInputs() - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the total number of Inputs mapped on all units in the map layer.
getNumberOfMappedInputs() - Method in class at.tuwien.ifs.somtoolbox.layers.MappedInputs
Returns the number of mapped input data.
getNumberOfMaps() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.GHSOMTestRunResult
 
getNumberOfMaps() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getNumberOfNotEmptyUnits() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Calculates and returns the number of units that are not empty, i.e.
getNumberOfPoints() - Method in class at.tuwien.ifs.somtoolbox.visualization.ColorGradient
 
getNumberOfRegion() - Method in class at.tuwien.ifs.somtoolbox.util.comparables.ComponentRegionCount
 
getNumberOfRegions(int[][]) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getNumberOfRegions(int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getNumberOfRuns() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResultCollection
 
getNumberOfSelectedInputs() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the number of inputs the user has selected to get information about their position on the SOM
getNumberofSharedClasses(boolean) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
Returns the Number of all shared Classes within this Grid
getNumberOfSilouettelessUnits() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the number of units on the map having no Silouette Value
getNumberOfTElessUnits() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the number of units on the map having no topographic error
getNumberOfVectorsMapped(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.UnitQEContainer
 
getNumberOfVisualizations() - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
 
getNumberOfVisualizations() - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
 
getNumberOfZeroValues(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the number of input vectors that have 0 as value in the given dimension
getNumBMUs() - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
Returns the number of best-matching units per input datum.
getNumbOfSent(int) - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.NavigationPanel
 
getNumbOfSent(int) - Method in class at.tuwien.ifs.somtoolbox.summarisation.parser.Scorer
 
getNumElements() - Method in class at.tuwien.ifs.somtoolbox.models.GHSOM.ExpandedUnits
 
getNumericalDataProps(int, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
FIXME: split this into simple single getter methods...
getNumIndicesLargerThanThreshold(double[], double) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
return the indices of all values larger than the given threshold
getNumInputs() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.InputQEContainer
the number of input items having the qe stored by this object
getNumUnits() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.UnitQEContainer
 
getNumVectors() - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
Returns the number of input vectors.
getObject(String) - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
getObjects() - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
getOccurrenceLabels(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
Get a set of labels for the given clustering based on the occurrences of attributes within clusters, i.e.
getOffset(long, long, long) - Static method in class at.tuwien.ifs.somtoolbox.data.distance.RandomAccessFileInputVectorDistanceMatrix
Find the offset of a specific value in the linear order
getOffset(int) - Method in class at.tuwien.ifs.somtoolbox.data.RandomAccessFileSOMLibInputData
 
getOffset(int, int) - Method in class at.tuwien.ifs.somtoolbox.data.RandomAccessFileSOMLibInputData
 
getOffsetZoom2(int, float) - Method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
getOffsetZoom3(int, float) - Method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
getOptAnnotationFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptApplicationDirectory(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptBackgroundImage(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptBaseDirName(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptBaseName(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptClassColoursFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptClassInformationFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptClasslist(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptCompressionRate() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptDatabaseName(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptDatabasePassword(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptDatabaseServerAddress(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptDatabaseTableNamePrefix(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptDatabaseUser(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptDataInformationFileFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptDataWinnerMappingFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptDecodedOutputDir(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptDecodeProbability(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptDimension(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptDocument() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptDrawUnitGrid(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptFileNamePrefix(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptFileNameSuffix(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptFlip(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptGZip(boolean, boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptHeight(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptHighlightedDataNamesFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptHtmlFileName() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptIgnoreFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptImageFileName() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptImageFileType(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInitialPalette(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInitialVisParams(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInitialVisualisation(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInput() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInputCorrections(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInputDirectory(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInputFileName(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInputFileName() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInputFormat(boolean, String[]) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInputI(int) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInputLabel(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInputVectorDistanceMatrix(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInputVectorFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptInterleave(boolean, Integer) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptK(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptKaskiNumber(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptKeepInputsFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptLabelFileName(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptLabeling(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptLinkageFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptMapDescriptionFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptMergeMode() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptMethod() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptMetric(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptMetricParams(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptNameMappingFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptNormalizeWeights() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptNormMethod(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptNumberLabels(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptNumberLabels(boolean, String) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptNumberNeighbours(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptNumberVariants(boolean, Integer) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptNumberWinners(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptOriginalText(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptOutputDirectory(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptOutputFileName(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptOutputFormat(boolean, String[]) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptOutputFormat(boolean, String, String[]) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptOutputVector() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptProperties(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptQualityMeasureClass(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
Quality Measure Class (e.g.
getOptQualityMeasureVariant(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
Quality Measure variant
getOptRegressionInformationFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptRemoveDirName(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptReplace(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptReplacement(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptRotation(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptSetSecondSOM(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptShowLabels() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptSOMLibInputs(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptSOMLibMaps(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptSomPAKFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptStartIndex(boolean, Integer) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptStemmedDirectory(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptTemplateVectorFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptUnitDescriptionFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptUnstemmedDirectory(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptUseMultiCPU(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptViewerWorkingDir(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptVisualisations(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptWeightVectorFile(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptWeightVectorFileInit(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptWidth(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOptXMLStructures(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getOrCreateValue(Map<String, HashSet<String>>, String) - Static method in class at.tuwien.ifs.somtoolbox.util.CollectionUtils
 
getOrCreateValue(HashMap<Integer, HashMap<String, Integer>>, Integer) - Static method in class at.tuwien.ifs.somtoolbox.util.CollectionUtils
 
getOrientation() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
getOrientation() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PaletteDisplayer
Returns the components orientation.
getOrientation(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticNode
 
getOriginalConfiguration(String, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
Returns an array with the original identification configuration , of how the qualifier QM should behave on MAXIMUM / MINIMUM Value
getOriginalDistance() - Method in class at.tuwien.ifs.somtoolbox.input.InputCorrections.InputCorrection
 
getOuputFileParser() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.AbstractOptionFactory
 
getOurMixerAt(int) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.LineListModel
 
getOurMixerIdString(int) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.LineListModel
 
getOurMixerInfoAt(int) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.LineListModel
 
getOutBasename() - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PlaylistAnalysis
 
getOutDir() - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PlaylistAnalysis
 
getOutlierCountThreshold() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
getOutlierPercentThreshold() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
getOutputDirectoryParser() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.AbstractOptionFactory
 
getOutputPath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
getPaintList() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.PieChartPNode
 
getPaintList() - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
Get the class colours as PaintList.
getPalette() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
 
getPalette() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PaletteDisplayer
Get the palette that is displayed.
getPalette() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PalettePanel
 
getPalette() - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractMatrixVisualizer
 
getPalette() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusteringTree
Gest the current palette from the state.
getPalette() - Method in interface at.tuwien.ifs.somtoolbox.visualization.MatrixVisualizer
Gets the currently used palette.
getPaletteAsXML() - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
getPaletteByName(String) - Static method in class at.tuwien.ifs.somtoolbox.visualization.Palettes
 
getPaletteControl(Palette) - Static method in class at.tuwien.ifs.somtoolbox.apps.server.ServerPalettes
 
getPaletteControl(String) - Static method in class at.tuwien.ifs.somtoolbox.apps.server.ServerPalettes
 
getPaletteDrawingPanel() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes paletteDrawingPanel
getPaletteGroup() - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
getPaletteIndex(Palette) - Static method in class at.tuwien.ifs.somtoolbox.visualization.Palettes
 
getPalettesDir() - Method in class at.tuwien.ifs.somtoolbox.properties.SOMViewerProperties
 
getPanel() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.VisualizationControl
 
getPanelMainClass() - Method in class at.tuwien.ifs.commons.gui.SOMToolboxAppChooser
 
getParamID(SomFilePacker.SomFileEntries) - Static method in enum at.tuwien.ifs.somtoolbox.apps.helper.SomFilePacker.SomFileEntries
 
getParentFrame() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getParsedDocument(int) - Method in class at.tuwien.ifs.somtoolbox.summarisation.parser.Scorer
 
getParsedDocuments() - Method in class at.tuwien.ifs.somtoolbox.summarisation.parser.Scorer
 
getParsedDocuments() - Method in class at.tuwien.ifs.somtoolbox.summarisation.parser.SentenceParser
 
getPartition(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
Estimates the Areas for the Middle part of the given Axis
getPathFrom(String) - Static method in class at.tuwien.ifs.somtoolbox.util.FileUtils
 
getPathPrefix(String) - Static method in class at.tuwien.ifs.somtoolbox.util.FileUtils
returns the given path, if needed appended by a File.separator
getPCAdeterminedDims() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
This method calculates the most important Dimensions of the Dataset according to the results of a PCA, and rows the resulting dim-index in a new array on first index.
getPcmFile() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.DecoderThread
 
getPcmFile() - Method in class at.tuwien.ifs.somtoolbox.audio.DecoderThread
 
getPercent() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.Shift
 
getPercentageOfClassMembers(int) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
 
getPercOfZeroEntropyRegions() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
Returns the percentage of regions with 0 entropy
getPercOfZeroEntropyRegions() - Method in class at.tuwien.ifs.somtoolbox.visualization.EntropyVisualizer
returns the percentage of regions with 0 Entropy
getPgbTraining() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes pgbTraining
getPickable() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ToolTipPNode
 
getPlayList() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlaySOMPlayer
 
getPlayListItem(int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
getPlayListItems() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
getPlayListVisualizer() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PlaygroundPanel
 
getPnlAddRemoveColors() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes pnlAddRemoveColors
getPnlColors() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes jPanel
getPnlGo() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes pnlGo
getPnlInputData() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes pnlInputData
getPnlLog() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes pnlLog
getPnlMapSettings() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes pnlMapSettings
getPnlMerge() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
getPnlMisc() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes pnlMisc
getPnlModelSettings() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes pnlModelSettings
getPnlOutDir() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes pnlOutDir
getPnlSeperator() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes pnlSeperator
getPnlSettings() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes pnlSettings
getPnlSettings() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes pnlSettings
getPnlTv() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes pnlTv
getPnlVec() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes pnlVec
getPointFrom(int, double) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.Segment
 
getPointLocation(String) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
Calculates the absolute position of an input on the MapPNode.
getPoints() - Method in class at.tuwien.ifs.somtoolbox.apps.helper.DataSetGenerator
 
getPoints() - Method in class at.tuwien.ifs.somtoolbox.structures.ComponentLine2D
 
getPoints() - Method in class at.tuwien.ifs.somtoolbox.structures.ComponentLine3D
 
getPoints() - Method in class at.tuwien.ifs.somtoolbox.structures.DoubleVector2D
 
getPointsAsDoubles() - Method in class at.tuwien.ifs.somtoolbox.apps.helper.DataSetGenerator
 
getPointsAsFloats() - Method in class at.tuwien.ifs.somtoolbox.apps.helper.DataSetGenerator
 
getPositions() - Method in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
getPosOfNextInt(String, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PlaySOMPanel
parses a String for next integer, skipping spaces
getPostion() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
getPredecessor() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.IntrinsicDistance.UnitInfo
 
getPrediction(String) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibRegressInformation
 
getPreferredPaletteName() - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractMatrixVisualizer
Default implementation using Palettes.getDefaultPalette().
getPreferredPaletteName() - Method in class at.tuwien.ifs.somtoolbox.visualization.ComponentPlanesVisualizer
 
getPreferredPaletteName() - Method in class at.tuwien.ifs.somtoolbox.visualization.HitHistogramVisualizer
 
getPreferredPaletteName() - Method in interface at.tuwien.ifs.somtoolbox.visualization.MatrixVisualizer
Returns the name of the Palette this visualisation prefers as initial palette.
getPreferredPaletteName() - Method in class at.tuwien.ifs.somtoolbox.visualization.RegressionVisualiser
 
getPreferredPaletteName() - Method in class at.tuwien.ifs.somtoolbox.visualization.UMatrix
 
getPreferredScaleFactor() - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
Default implementation returning AbstractBackgroundImageVisualizer.preferredScaleFactor.
getPreferredScaleFactor() - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
Return the preferred scale factor for interpolation for this visualisation.
getPreferredScaleFactor() - Method in class at.tuwien.ifs.somtoolbox.visualization.CategoryPieChartVisualizer
 
getPreferredScaleFactor() - Method in class at.tuwien.ifs.somtoolbox.visualization.FlowBorderlineVisualizer
Scale for the FlowBorderlineVisualizer needs to be smaller, as the visualisation is made of lines, which cannot be scaled too much.
getPreferredScaleFactor() - Method in class at.tuwien.ifs.somtoolbox.visualization.HitHistogramVisualizer
 
getPreferredScaleFactor() - Method in class at.tuwien.ifs.somtoolbox.visualization.MinimumSpanningTreeVisualizer
 
getPreferredSize() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
Do not override this method.
getPreferredSize() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel.TitleRow
 
getPreferredSize() - Method in class at.tuwien.ifs.commons.gui.util.MaximisedJFrame
 
getPreferredSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PaletteDisplayer
 
getPreferredSize() - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.PalettePanel.DrawPalettePanel
 
getPreferredSize() - Method in class at.tuwien.ifs.somtoolbox.util.mnemonic.MapPanel
 
getPreferredSize(JComponent) - Method in class at.tuwien.ifs.somtoolbox.util.MultiLineToolTipUI
 
getPreferredSize() - Method in class at.tuwien.ifs.somtoolbox.visualization.ComparisonVisualizer.ComparisonControlPanel
 
getPrefuseTree() - Method in interface at.tuwien.ifs.somtoolbox.clustering.HierarchicalClusteringAlgorithm
 
getPrefuseTree() - Method in class at.tuwien.ifs.somtoolbox.clustering.WardClustering
 
getPreparedStatement(String) - Method in class at.tuwien.ifs.somtoolbox.database.DBConnector
Creates a prepared statement for the given query
getPreviousValidPoint(Point2D[], int) - Static method in class at.tuwien.ifs.somtoolbox.clustering.functions.ComponentLine2DDistance
 
getPreviousValidPoint(Point3d[], int) - Static method in class at.tuwien.ifs.somtoolbox.clustering.functions.ComponentLine3DDistance
 
getPrintString() - Method in class at.tuwien.ifs.somtoolbox.input.InputCorrections.InputCorrection
 
getProperties() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.GHSOMSettingsPanel
 
getProperties() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.GrowingSOMSettingsPanel
 
getProperties() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.MnemonicSOMSettingsPanel
 
getProperties() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMModelSettingsPanel
 
getPropertiesPath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
getProperty(Object) - Method in class at.tuwien.ifs.somtoolbox.data.InputDatum
Returns the value of a property specified by the key or null if the key does not exist.
getProperty(String) - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibMapDescription
 
getProperty(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.MySOMLibMapDescription
 
getProperty(String, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResultCollection
 
getPropertyFilePath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.RunResultSpecifierPane
 
getPropertyFilePath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getPropertyPane() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.RunResultSpecifierPane
creates and returns the Panel that contains the Values for specifying the location of the .props file
getProportion() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.Shift
 
getPurity() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.EntropyAndPurityCalculator
 
getQe() - Method in class at.tuwien.ifs.somtoolbox.layers.Label
Returns the quantization error of this label.
getQE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.InputQEContainer
return the quantization error, this container stores
getQE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.MapQEContainer
 
getQE() - Method in interface at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QEContainer
 
getQE() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.UnitQEContainer
 
getQEForUnit(int, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
Returns the quantization error of the unit at the specified coordinates That is, for all inputs mapped to this unit, the distance between the weigh vector of the input item and the unit is summed and returned
getQMContainer() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getQMIntersectionList(String, String, Unit[], int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
Returns a 9 field arrayList containing intersection units of QM Name1 & Name2, on units, that were chosen with the comparing operation type
getQuad() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.IntrinsicDistance.UnitInfo
 
getQualities() - Method in class at.tuwien.ifs.somtoolbox.models.GHSOM.ExpandedUnits
 
getQuality(int) - Method in class at.tuwien.ifs.somtoolbox.models.GHSOM.ExpandedUnits
 
getQualityIdentifier(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
Returns a String Representation of the Meaning of the Position of the ArrayList Array
getQualityMeasure() - Static method in class at.tuwien.ifs.somtoolbox.apps.initEval.Measure
 
getQualityMeasure() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getQualityMeasure() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getQualityMeasure() - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the quality information.
getQuantErrorUnit(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getQuantErrorUnit(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getQuantErrorUnit(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the quantization error of a certain unit specified by coordinates x and y.
getQuantErrorUnit(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the quantization error of a certain unit specified by coordinates x and y.
getQuantErrorUnitAvg(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getQuantErrorUnitAvg(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getQuantErrorUnitAvg(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the mean quantization error of a certain unit specified by coordinates x and y.
getQuantErrorUnitAvg(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the mean quantization error of a certain unit specified by coordinates x and y.
getQuiver() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
 
getR() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.Spearman
 
GetRandomIndex(TopographicProduct.DistanceTag[], int) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.TopographicProduct
 
getRandomInputDatum(int, int) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
getRandomInputDatum(int, int) - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Gets a random input sample from the input data set.
getRank() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.TopographicProduct.DistanceTag
 
getRank() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.Trustworthiness_NeighborhoodPreservation.DistanceTag
 
getRdoCycles() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes rdoCycles
getRdoIterations() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes rdoIterations
getReadyVisualizationNames() - Static method in class at.tuwien.ifs.somtoolbox.visualization.Visualizations
 
getReadyVisualizations() - Static method in class at.tuwien.ifs.somtoolbox.visualization.Visualizations
 
getRegion(int) - Static method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
Returns the String Name for the region with index i
FIXME: refactor this with a hashmap or similar
getRegion(ArrayList<SOMRegion>, double, double) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.RegionManager
 
getRegion(ArrayList<SOMRegion>, Pnt) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.RegionManager
 
getRegionAssignement(int[][], int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getRegionEntropyError(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns Entropy (Max/Min) error Region
getRegionOccurance(String, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
Return an ArrayList with the SemanticNodes of ocurrances for the given quality measure and class
getRegions() - Method in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
getRegions() - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.RegionManager
 
getRelationNumber(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
getRelationNumberAndWeights(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
getRemainingUnit(GrowingCellUnit, GrowingCellUnit) - Method in class at.tuwien.ifs.somtoolbox.util.growingCellStructures.GrowingCellTetraheder
 
getRendererComponent(int, int, Object, CellStyle, boolean, boolean, JGrid) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.MyGridCellRenderer
 
getResultDoc(int) - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.ResultHandler
 
getResultDocs() - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.MultiDocumentHandler
 
getResultFileNames() - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.MultiDocumentHandler
 
getResultScores() - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.MultiDocumentHandler
 
getResultScores(int) - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.ResultHandler
 
getRevision() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getRevision() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getRevision() - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the revision string of this layer.
getRGBString(int[]) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
creates an representation of a color that can be used in html or css takes an int - array of size 3 and transforms it to a hex String of structure #rrggbb The array must have at least length 3 and must not contain null values.
getRightNode() - Method in class at.tuwien.ifs.somtoolbox.clustering.HierarchicalCluster
 
getRoot() - Method in class at.tuwien.ifs.somtoolbox.models.GHSOMLevelLayer
 
getRootKey(SomFilePacker.SomFileEntries) - Static method in enum at.tuwien.ifs.somtoolbox.apps.helper.SomFilePacker.SomFileEntries
 
getRotation() - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
Gets the current rotation of this label.
getRow(int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector.UserTableModel
 
getRowCount() - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
getRowCount() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector.UserTableModel
 
getRun(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResultCollection
 
getRunId() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getScaledBackgroundImageHeight() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getScaledBackgroundImageHeight(BackgroundImageVisualizer) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getScaledBackgroundImageWidth() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getScaledBackgroundImageWidth(BackgroundImageVisualizer) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getScientificDescription(String) - Static method in class at.tuwien.ifs.somtoolbox.reportgenerator.TextualDescriptionProvider
gets the scientific Description of the Method with ID, or null otherwise
getScores(int, String) - Method in class at.tuwien.ifs.somtoolbox.summarisation.parser.Scorer
returns an array of scores of each sentence
getScpColors() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes scpColors
getScpDescription() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes scpDescription
getScpUsers() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
This method initializes scpUsers
getScreenWidth() - Method in class at.tuwien.ifs.somtoolbox.util.StdErrProgressWriter
 
getSDHStep() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
getSecMapXOffset() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
 
getSecMapYOffset() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
 
getSecond() - Method in class at.tuwien.ifs.somtoolbox.layers.UnitPair
 
getSecondMap() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
 
getSelectedAttributeType() - Method in class at.tuwien.ifs.somtoolbox.visualization.RhythmPatternsAttributeVisualizer
 
getSelectedClass() - Method in class at.tuwien.ifs.commons.models.ClassComboBoxModel
 
getSelectedClasses() - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
getSelectedClasses() - Method in class at.tuwien.ifs.somtoolbox.properties.SOMProperties
Returns an ArrayList of Strings containing the class names which should be excluded from training.
getSelectedClassIndices() - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
getSelectedClassMode() - Method in class at.tuwien.ifs.somtoolbox.properties.SOMProperties
 
getSelectedDocument() - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.NavigationPanel
 
getSelectedInputId(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the id of the inputVector at position index in the list of selected inputs each input vector is identified by an id, which is its index in the complete input.
getSelectedItem() - Method in class at.tuwien.ifs.commons.models.ClassComboBoxModel
 
getSelectedQualitMeasure() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
getSelectedQualityMeasures() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
Returns a list containing the selected quality measures
getSelectedSongs() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractSelectionPanel
get a String[] containing all objects (absolute paths) in current selection panel
getSelectedSongs(int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractSelectionPanel
get a String[] containing all objects (absolute paths) in the given selection panel
getSelection() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.handlers.OrderedPSelectionEventHandler
Returns a copy of the currently selected nodes.
getSelectionEventHandler() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MyPCanvas
Get the selection event handler associated with this canvas.
getSelectPanel() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes selectPanel
getSemanticNodeArray() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
returns the semantic node array
getSeparatorFromString(String) - Static method in class at.tuwien.ifs.somtoolbox.apps.helper.SOMLibDataInfoGenerator
 
getSharedInputObjects() - Method in class at.tuwien.ifs.somtoolbox.models.AbstractNetworkModel
 
getShortForm(String, String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticNode
Gets a short form for directions
FIXME: refactor this
getShortName() - Method in class at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizerInstance
 
getShortName() - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
getShowDecorators() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel.TitleRow
 
getShowOnlySelectedClasses() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
getShowPercent() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PaletteDisplayer
 
getShowTitleDecoration() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
see TitledCollapsiblePanel.getShowTitleDecoration()
getSigma() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getSignalCounter() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellUnit
 
getSignalFrequencyWinner() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getSize() - Method in class at.tuwien.ifs.commons.models.ClassComboBoxModel
 
getSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.LineListModel
getSize
getSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList.PlayListModel
 
getSize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.RhythmPattern
 
getSmoothingFactor() - Method in class at.tuwien.ifs.somtoolbox.visualization.SmoothedDataHistograms
Return the currently used smoothing factor.
getSmoothingFactorDefault() - Method in class at.tuwien.ifs.somtoolbox.apps.server.SOMPageParameters
 
getSnappedCentroids(double[][][], double, double, double, DistanceFunctionType) - Static method in class at.tuwien.ifs.somtoolbox.apps.SecondLifeFileReaderMain
 
getSom() - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PlaylistAnalysis
 
getSOMComparision() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
 
getSOMDimensions(TestRunResult) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.output.OutputReportHtml
returns the dimension of the SOM nicley formatted.
getSOMDimensions(TestRunResult) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.output.OutputReportLATEX
returns the dimension of the SOM nicley formatted.
getSOMDimensions() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
Returns the SOMs Dimensions
getSOMLibRegressInformation() - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
getSomPakName() - Method in enum at.tuwien.ifs.somtoolbox.layers.Layer.GridLayout
 
getSOMViewer() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.CommonSOMViewerStateData
 
getSOMViewerProperties() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.CommonSOMViewerStateData
 
getSOMViewerState() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
getSomXSize() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getSomYSize() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getSongs() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
getSortingValue() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterLabel
 
getSourceThreshold() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
getSourceUnit() - Method in class at.tuwien.ifs.somtoolbox.input.InputCorrections.InputCorrection
 
getSouthPanel() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes southPanel
getSpaces(int) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
 
getSpaces(int) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
 
getSpnIterations() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes spnIterations
getSpnLabels() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes spnLabels
getSpnLearnrate() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes spnLearnrate
getSpnRandomSeed() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes spnRandomSeed
getSpnSigma() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes spnSigma
getSpnTargetColorCount() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes spnTargetColorCount
getSpnThreads() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes spnThreads
getSpnWinnerCount() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes spnWinnerCount
getSpnXSize() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes spnXSize
getSpnYSize() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes spnYSize
getSSE() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
Get the sum of the squared error for all clusters.
getSSEs() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
Get the sum of the squared error for single clusters.
getStableClusters1(ClusterNode, int, int, Vector<double[]>) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
Quality measure for clusters that didn't work
getStableClusters2(ClusterNode, double, int, Vector<double[]>) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
tries to sort all possible clusters by their "stability" that is, tries to give a measure about how good a cluster is.
getStableClusters3(ClusterNode, double, int, Vector<double[]>) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
quality measure for clusters that didn't work
getStableCountThreshold() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
getStablePercentThreshold() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
getStandalonePaletteSelector() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
 
getStarCoords(Unit, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getStart() - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Edge
 
getStartX() - Method in class at.tuwien.ifs.somtoolbox.util.Cuboid
 
getStartY() - Method in class at.tuwien.ifs.somtoolbox.util.Cuboid
 
getStartZ() - Method in class at.tuwien.ifs.somtoolbox.util.Cuboid
 
getState() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getState() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
 
getState() - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.NavigationPanel
 
getStateObject() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns an instance of CommonSOMViewerStateData, that stores basic properties for visualization of SOMs and is needed for creating most of the images
getSteps() - Method in class at.tuwien.ifs.somtoolbox.util.StdErrProgressWriter
 
getSubLevelLayer(GrowingLayer) - Method in class at.tuwien.ifs.somtoolbox.models.GHSOMLevelLayer
returns the levelLayer of a layer - all sub-layers of any units will be added
getSubstituteCentroid() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
Get a new centroid for empty clusters.
getSuffix(String, boolean) - Static method in class at.tuwien.ifs.somtoolbox.util.FileUtils
Computes the suffix (extension) of a file name, with or without .gz
getSumClicked() - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.NavigationPanel
 
getSumOf(double[]) - Static method in class at.tuwien.ifs.commons.util.MathUtils
sums up the values in the array and returns the sum
getSumOf(int[]) - Static method in class at.tuwien.ifs.commons.util.MathUtils
sums up the values in the array and returns the sum
getSuperUnit() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns the superordinate unit, or null if none exists.
getSwitchDocumentMode() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchDrawLines() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchHtmlOutput(boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchIgnoreLabelsWithZero() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchIsDenseData() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchIsNormalized() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchNoPlayer() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchPreserveFeatureOrder() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchPreserveVectorOrder() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchSkipDataWinnerMapping() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchSkipInputsWithoutClass() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchSkipInstanceNames() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchTabSeparatedClassFile() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchVerboose() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getSwitchWriteTVFile() - Static method in class at.tuwien.ifs.somtoolbox.apps.config.OptionFactory
 
getTableCellEditorComponent(JTable, Object, boolean, int, int) - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ButtonCellEditor
 
getTableCellEditorComponent(JTable, Object, boolean, int, int) - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ColorCellEditor
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ButtonCellRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ColorCellRenderer
 
getTag() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.Trustworthiness_NeighborhoodPreservation.DistanceTag
 
gettargetThreshold() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
getTargetThreshold() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
getTargetUnit() - Method in class at.tuwien.ifs.somtoolbox.input.InputCorrections.InputCorrection
 
getTau() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getTau2() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.GGSOMTestRunResult
returns the training parameter tau2 (that is the measure of the maximum data representation granularity that is used in the training process)
getTau2() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getTblUsers() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
This method initializes tblUsers
getTemplateFilename() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the complete filename of the file containing the template data complete filename means including the path.
getTemplatePath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
getTemplateVector() - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
getTemplateVector() - Method in class at.tuwien.ifs.somtoolbox.data.TemplateVectorElement
Returns the TemplateVector this element is associated to.
getTermTableName() - Method in class at.tuwien.ifs.somtoolbox.database.DBConnector
 
getTestrunResultCollection(DatasetInformation, int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
Makes a report on the default Map.
getText() - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
Gets the current text of this label.
getText(String) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.QuerySOMPanel
 
getText(String) - Static method in class at.tuwien.ifs.somtoolbox.reportgenerator.TextualDescriptionProvider
 
getTexts() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getTFxIDFVectorFromTerms(Hashtable<String, Integer>) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibTemplateVector
 
getThematicClassMapVisualizer() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
Deprecated. use Visualizations instead
getThreshold(DoubleArrayList, int) - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.ResultHandler
 
getThresholds() - Method in class at.tuwien.ifs.somtoolbox.layers.AdaptiveCoordinatesVirtualLayer
 
getTitle() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
getTitle() - Method in class at.tuwien.ifs.somtoolbox.data.metadata.MP3VectorMetaData
 
getTitleBackground() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
getTitleBorder() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
getTitleScores() - Method in class at.tuwien.ifs.somtoolbox.summarisation.methods.TitleMethod
returns Title-Scores
getToDraw() - Method in class at.tuwien.ifs.somtoolbox.util.mnemonic.MapPanel
 
getToggleIcon() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel.TitleRow
 
getTokens(String, String) - Method in class at.tuwien.ifs.somtoolbox.summarisation.methods.PartOfSpeech
returns type of tokens in the given line sentence, whether nouns, verbs...
getTopologicalNeighbors(GrowingCellUnit) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getTopology() - Method in class at.tuwien.ifs.somtoolbox.input.SOMPAKFormatInputReader
 
getTotalNumbers() - Method in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
getTouchedTetraheders(GrowingCellUnit, GrowingCellUnit) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
Returns Tetraheders that have u1 and u2 in common
getTour() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AutoRoutePanel.SimpleTSPSolver
 
getTPStep() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
getTrail(int, ArrayList<Integer>) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticClass
Finds a Trail for unit i through the class (all units with distance 1 will be added to one trail)
getTrainDuration() - Static method in class at.tuwien.ifs.somtoolbox.apps.initEval.Measure
 
getTrainingDataInfo() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
Returns the names of the 3 files, used for training
getTree(GeneralUnitPNode[][], int) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.NonHierarchicalTreeBuilder
 
getTWStep() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
getTxtDescription() - Method in class at.tuwien.ifs.commons.gui.SOMToolboxAppChooser
 
getTxtDescription() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes txtDescription
getTxtGroup() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes txtGroup
getTxtHttpPort() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
getTxtInputVecotrFile() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes txtInputVecotrFile
getTxtLogFile() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes txtLogFile
getTxtLongname() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes txtLongname
getTxtOutDir() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes txtOutDir
getTxtPIN() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
This method initializes txtPIN
getTxtPort() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
This method initializes txtPort
getTxtShortname() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes txtShortname
getTxtTemplateVecotrFile() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes txtTemplateVecotrFile
getTxtTitle() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes txtTitle
getTxtUnitFile() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.MnemonicSOMSettingsPanel
This method initializes txtUnitFile
getType(Class<? extends SOMToolboxApp>) - Static method in enum at.tuwien.ifs.somtoolbox.apps.SOMToolboxApp.Type
 
getType() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ArrowPNode
 
getType() - Method in class at.tuwien.ifs.somtoolbox.data.SOMVisualisationData
 
getType() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
gets the Type of the Testrunresult (HTML, LATEX)
getType() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.Shift
 
getTypeHighlight() - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.NavigationPanel
 
getUids() - Method in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
getUmValues(GrowingSOM, DoubleMatrix2D, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer
Adapted from AbstractMatrixVisualizer.createImage(GrowingSOM, DoubleMatrix2D, int, int, boolean).
FIXME: check if the two methods can be merged.
getUniqueElements(Collection<? extends String>, Collection<? extends String>) - Static method in class at.tuwien.ifs.somtoolbox.util.CollectionUtils
Returns two ArrayLists, containing the elements only present in the first and second argument, respectively.
getUniqueElements(String[], String[]) - Static method in class at.tuwien.ifs.somtoolbox.util.CollectionUtils
 
getUnit() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
Returns the associtated SOM unit for this node
getUnit(int, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
Return the GeneralUnitPNode at the unit index x/y.
getUnit(Unit) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
Return the GeneralUnitPNode at the unit index x/y.
getUnit(int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getUnit(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getUnit(int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getUnit(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getUnit(int, int) - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the Unit at the position specified by the x and y arguments.
getUnit(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the Unit at the position specified by the x and y arguments.
getUnit() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.IntrinsicDistance.UnitInfo
 
getUnit(int) - Method in class at.tuwien.ifs.somtoolbox.models.GHSOM.ExpandedUnits
 
getUnit() - Method in class at.tuwien.ifs.somtoolbox.util.comparables.UnitDistance
 
getUnit() - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Node
 
getUnit() - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
getUnitCentreLocation(int, int, double, double) - Static method in class at.tuwien.ifs.somtoolbox.util.VisualisationUtils
 
getUnitCentreLocation(Unit, double, double) - Static method in class at.tuwien.ifs.somtoolbox.util.VisualisationUtils
 
getUnitCentreLocation(Unit, double, double, int, int) - Static method in class at.tuwien.ifs.somtoolbox.util.VisualisationUtils
 
getUnitCoords(UnitQEContainer) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.output.SOMDescriptionHTML
formats a list of units for use in the quantization error list the created format is "on unit(s) at [x,y] - z vectors mapped, [x2,y2] - z2 vectors mapped, ...
getUnitCoords(UnitQEContainer) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.output.SOMDescriptionLATEX
formats a list of units for use in the quantization error list the created format is "on unit(s) at [x,y] - z vectors mapped, [x2,y2] - z2 vectors mapped, ...
getUnitCoords(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.InputQEContainer
returns a string of format x-coord x y-coord of the unit at the specified index
getUnitCoords(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.UnitQEContainer
 
getUnitCount() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getUnitCount() - Method in class at.tuwien.ifs.somtoolbox.layers.MnemonicGrowingLayer
 
getUnitDescriptionFileName() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
getUnitDescriptionFileName() - Method in class at.tuwien.ifs.somtoolbox.input.ESOMFormatInputReader
 
getUnitDescriptionFileName() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the name of the unit description file, or null if not loaded.
getUnitDescriptionFileName() - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibFormatInputReader
 
getUnitDescriptionFileName() - Method in class at.tuwien.ifs.somtoolbox.input.SOMPAKFormatInputReader
 
getUnitDescriptionFileName(String, String, String, boolean) - Static method in class at.tuwien.ifs.somtoolbox.output.SOMLibMapOutputter
 
getUnitDistance(int) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.IntrinsicDistance.QuadUnitDistance
 
getUnitDistanceMatrix() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Computes a distance matrix between all Units in the Layer
getUnitFilePath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.RunResultSpecifierPane
 
getUnitFilePath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getUnitForDatum(String) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getUnitForDatum(String) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getUnitForDatum(String) - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the unit onto which the datum specified by its name by argument name is mapped.
getUnitForIndex(int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getUnitHeight() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
Return the unit height in pixels.
getUnitIndex(int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns the index of given unit coordinates.
getUnitLabels(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getUnitLabels(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getUnitLabels(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns an array of strings containing the names of labels of a certain unit specified by coordinates x and y.
getUnitLabels(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns an array of strings containing the names of labels of a certain unit specified by coordinates x and y.
getUnitLabels() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
 
getUnitLabelsQe(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getUnitLabelsQe(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getUnitLabelsQe(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns an array of double values containing the quantization error of the labels of a unit specified by coordinates x and y.
getUnitLabelsQe(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns an array of double values containing the quantization error of the labels of a unit specified by coordinates x and y.
getUnitLabelsWgt(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getUnitLabelsWgt(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getUnitLabelsWgt(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns an array of double values containing the mean values of the labels of a unit specified by coordinates x and y .
getUnitLabelsWgt(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns an array of double values containing the mean values of the labels of a unit specified by coordinates x and y .
getUnitMappedTo(InputDatum) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
returns the unit the specified input item is mapped to
getUnitMAXQualities(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
 
getUnitMINQualities(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
 
getUnitPane() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.RunResultSpecifierPane
creates and returns the Panel that contains the Values for specifying the location of the .unit file
getUnitPath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.EntropyMeasure
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.IntrinsicDistance
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.InversionMeasure
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.MetricMultiScaling
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.PseudoSilhouetteValue
 
getUnitQualities(String) - Method in interface at.tuwien.ifs.somtoolbox.layers.quality.QualityMeasure
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.QuantizationError
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.SammonMeasure
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.SilhouetteValue
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.SOMDistortion
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.SOMSilhouetteValue
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.SpearmanCoefficient
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.TopographicError
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.TopographicProduct
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.Trustworthiness_NeighborhoodPreservation
 
getUnitQualities(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
 
getUnitQualityDescriptions() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.AbstractQualityMeasure
 
getUnitQualityDescriptions() - Method in interface at.tuwien.ifs.somtoolbox.layers.quality.QualityMeasure
 
getUnitQualityNames() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.AbstractQualityMeasure
 
getUnitQualityNames() - Method in interface at.tuwien.ifs.somtoolbox.layers.quality.QualityMeasure
 
getUnits() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns all units of the layer in a 3D array.
getUnits() - Method in class at.tuwien.ifs.somtoolbox.models.GHSOM.ExpandedUnits
 
getUnitsNode() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
getUnitsWithStopsOnThemAndHowMany() - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
Get a Hashtable of unit coordinates and the number of centres which lie on it.
getUnitWidth() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
Return the unit width in pixles.
getUrlMappedSoms(int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getUrlMappedSoms(int, int, int) - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getUrlMappedSoms(int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns an array of strings containing the file names of subordinate maps of a certain unit specified by coordinates x and y.
getUrlMappedSoms(int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns an array of strings containing the file names of subordinate maps of a certain unit specified by coordinates x and y.
getValue(int, int) - Method in class at.tuwien.ifs.somtoolbox.data.DataBaseSOMLibSparseInputData
 
getValue(int, int) - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Returns the value of the y-th feature of input vector x.
getValue(int, int) - Method in class at.tuwien.ifs.somtoolbox.data.RandomAccessFileSOMLibInputData
 
getValue(int, int) - Method in class at.tuwien.ifs.somtoolbox.data.SimpleMatrixInputData
 
getValue(int, int) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibSparseInputData
 
getValue() - Method in class at.tuwien.ifs.somtoolbox.layers.Label
Returns the value of this label.
getValue() - Method in class at.tuwien.ifs.somtoolbox.util.SwingWorker
Get the value produced by the worker thread, or null if it hasn't been constructed yet.
getValueAt(int, int) - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
getValueAt(int, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ActivityGridModel
 
getValueAt(int, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector.UserTableModel
 
getValues() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.PieChartPNode
 
getVariant() - Method in class at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizerInstance
 
getVariantException(int, Class<?>) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
 
getVector() - Method in class at.tuwien.ifs.somtoolbox.data.InputDatum
Returns the vector of the InputDatum.
getVectorDim() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns the dimension of the input vectors, that is the same as the number of attributes used to describe the objects.
getVectors() - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getVectors() - Method in class at.tuwien.ifs.somtoolbox.input.MnemonicSOMLibFormatInputReader
 
getVectors() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns a 4-dimensional double array of the weight vectors.
getVectPos(String) - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
Finds the position of input vector by comparing its label.
getVersion() - Static method in class at.tuwien.ifs.somtoolbox.SOMToolboxMetaConstants
 
getVirtualLayer() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getVirtualUnit(double, int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.AdaptiveCoordinatesVirtualLayer
 
getVis() - Method in class at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizerInstance
 
getVisData() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
helper function to initialize the Shared data object for visualizations
getVisible() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ArrowPNode
Is the visibility of this ArrowPNode currently set to true?
getVisualisation() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
Gets the visualisation variant from the current MapPNode.currentVisualization obtaining the values from MapPNode.currentVisualizationVariant, MapPNode.getScaledBackgroundImageWidth() and MapPNode.getScaledBackgroundImageHeight().
getVisualisationsControl(BackgroundImageVisualizerInstance) - Static method in class at.tuwien.ifs.somtoolbox.apps.server.ServerVisualizations
 
getVisualisationsControl(ArrayList<BackgroundImageVisualizerInstance>, BackgroundImageVisualizerInstance) - Static method in class at.tuwien.ifs.somtoolbox.apps.server.ServerVisualizations
 
getVisualisationsControl(BackgroundImageVisualizer, int) - Static method in class at.tuwien.ifs.somtoolbox.apps.server.ServerVisualizations
 
getVisualisationsControl(String) - Static method in class at.tuwien.ifs.somtoolbox.apps.server.ServerVisualizations
 
getVisualisationSelect(String, String) - Method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
getVisualization(CommonSOMViewerStateData, int) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.ExportUtils
 
getVisualization(AbstractBackgroundImageVisualizer, int, GrowingSOM, int) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.ExportUtils
 
getVisualization(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
Returns the requested visualization image, either by retrieving it from the image cache, or by invoking AbstractBackgroundImageVisualizer.createVisualization(int, GrowingSOM, int, int) to create the image new.
getVisualization(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractMatrixVisualizer
overriding the method in the superclass as we have a different cache key, and to set the min & max matrix values to -1
getVisualization(int, GrowingSOM, int, int) - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
Returns a visualisation image.
getVisualization(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
getVisualization(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.SearchResultHistogramVisualizer
 
getVisualization(int, int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.SmoothedDataHistograms
Visualisation for a specific smoothing factor
getVisualizationByName(String) - Static method in class at.tuwien.ifs.somtoolbox.visualization.Visualizations
Tries to locate a visualisation by the given name.
getVisualizationDescription(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
 
getVisualizationDescription(int) - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
Gets the descriptions of a specified visualisation variant.
getVisualizationDescriptions() - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
 
getVisualizationDescriptions() - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
Gets the descriptions of all visualisation variants provided by this visualiser.
getVisualizationFlavours(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
Default implementation which returns a map of size 1 with the standard, unparameterised visualisation of the given variant.
getVisualizationFlavours(int, GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
Default implementation equal to AbstractBackgroundImageVisualizer.getVisualizationFlavours(int, GrowingSOM, int, int).
getVisualizationFlavours(int, GrowingSOM, int, int, Map<String, String>) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
Default implementation equal to AbstractBackgroundImageVisualizer.getVisualizationFlavours(int, GrowingSOM, int, int).
getVisualizationFlavours(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ActivityHistogram
 
getVisualizationFlavours(int, GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ActivityHistogram
 
getVisualizationFlavours(int, GrowingSOM, int, int, Map<String, String>) - Method in class at.tuwien.ifs.somtoolbox.visualization.ActivityHistogram
 
getVisualizationFlavours(int, GrowingSOM, int, int) - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
Returns all visualisation flavours of the given variant, e.g.
getVisualizationFlavours(int, GrowingSOM, int, int, int) - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
Returns all visualisation flavours of the given variant just as BackgroundImageVisualizer.getVisualizationFlavours(int, GrowingSOM, int, int), but limiting the number of flavours to the given maximum number.
getVisualizationFlavours(int, GrowingSOM, int, int, Map<String, String>) - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
Returns all visualisation flavours of the given variant just as BackgroundImageVisualizer.getVisualizationFlavours(int, GrowingSOM, int, int), but limiting the number of flavours by the given parameters.
getVisualizationFlavours(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ClusterConnectionsVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ClusterConnectionsVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int, Map<String, String>) - Method in class at.tuwien.ifs.somtoolbox.visualization.ClusterConnectionsVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ComponentPlanesVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ComponentPlanesVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int, Map<String, String>) - Method in class at.tuwien.ifs.somtoolbox.visualization.ComponentPlanesVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.FlowBorderlineVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.FlowBorderlineVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int, Map<String, String>) - Method in class at.tuwien.ifs.somtoolbox.visualization.FlowBorderlineVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int, Map<String, String>) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.NeighbourhoodGraph
 
getVisualizationFlavours(int, GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.NeighbourhoodGraph
 
getVisualizationFlavours(int, GrowingSOM, int, int, Map<String, String>) - Method in class at.tuwien.ifs.somtoolbox.visualization.NeighbourhoodGraph
 
getVisualizationFlavours(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.RhythmPatternsAttributeVisualizer
Saves all flavours of RP attribute types (#attributeTypes).
getVisualizationFlavours(int, GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.RhythmPatternsAttributeVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int, Map<String, String>) - Method in class at.tuwien.ifs.somtoolbox.visualization.RhythmPatternsAttributeVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.SmoothedDataHistograms
 
getVisualizationFlavours(int, GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.SmoothedDataHistograms
 
getVisualizationFlavours(int, GrowingSOM, int, int, Map<String, String>) - Method in class at.tuwien.ifs.somtoolbox.visualization.SmoothedDataHistograms
 
getVisualizationFlavours(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer
 
getVisualizationFlavours(int, GrowingSOM, int, int, Map<String, String>) - Method in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer
 
getVisualizationFlavours_K(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.NeighbourhoodGraph
 
getVisualizationFlavours_R(int, GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.NeighbourhoodGraph
 
getVisualizationName(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
 
getVisualizationName(int) - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
Gets the name of a specified visualisation variant.
getVisualizationNames() - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
 
getVisualizationNames() - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
Gets the names of all visualisation variants provided by this visualiser.
getVisualizations() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
Deprecated. use Visualizations.singleton instead
getVisualizations() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
Deprecated. use Visualizations instead
getVisualizationShortName(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
 
getVisualizationShortName(int) - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
Gets the short name of a specified visualisation variant.
getVisualizationShortName(String) - Static method in class at.tuwien.ifs.somtoolbox.visualization.Visualizations
 
getVisualizationShortNames() - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
 
getVisualizationShortNames() - Method in interface at.tuwien.ifs.somtoolbox.visualization.BackgroundImageVisualizer
Gets the short names of all visualisation variants provided by this visualiser.
getVoronoiEstimate() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellUnit
 
getWeight() - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Edge
 
getWeightFilePath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.RunResultSpecifierPane
 
getWeightFilePath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
getWeightPane() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.RunResultSpecifierPane
creates and returns the Panel that contains the Values for specifying the location of the .wgt file
getWeightPath() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
getWeightVector() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Returns the weight vector of this unit.
getWeightVectorFileName() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
getWeightVectorFileName() - Method in class at.tuwien.ifs.somtoolbox.input.ESOMFormatInputReader
 
getWeightVectorFileName() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the name of the weight vector file, or null if not loaded.
getWeightVectorFileName() - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibFormatInputReader
 
getWeightVectorFileName() - Method in class at.tuwien.ifs.somtoolbox.input.SOMPAKFormatInputReader
 
getWeightVectorFileName(String, String, String, boolean) - Static method in class at.tuwien.ifs.somtoolbox.output.SOMLibMapOutputter
 
getWeightVectorFromBatchSomNeighbourhood() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
 
getWekaClassHeader(String[]) - Static method in class at.tuwien.ifs.somtoolbox.data.InputDataWriter
 
getWidth() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
Return the map width in pixels, i.e.
getWidth() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
get/set Height/Width/X/Y: used for the bounding rectangle of the cluster.
getWinner(InputDatum) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getWinner(InputDatum, DistanceMetric) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns the winner unit for a given input datum specified by argument input.
getWinner(InputDatum, AbstractWeightedMetric) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns the winner for a given unit, using a weighted distance metric.
getWinner(InputDatum) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns the winner unit for a given input datum specified by argument input.
getWinner(InputDatum) - Method in class at.tuwien.ifs.somtoolbox.layers.MnemonicGrowingLayer
 
getWinnerFromQuery(String, SOMLibTemplateVector) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Return the winning unit for the given query.
getWinners(InputDatum, int, DistanceMetric) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns a number of best-matching units sorted by distance (ascending) for a given input datum.
getWinners(InputDatum, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getWinnersAndDistances(InputDatum, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getWinnersAndDistances(InputDatum, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Returns a number of best-matching units and distances sorted by distance (ascending) for a given input datum.
getWinnersAndDistances(InputDatum, int) - Method in class at.tuwien.ifs.somtoolbox.layers.MnemonicGrowingLayer
 
getWinnersFromQuery(String, int, SOMLibTemplateVector) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getWinningInputDataFromQuery(String, int, SOMLibTemplateVector) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getWithValue() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
Does the Label of this Cluster contain a value
getX() - Method in class at.tuwien.ifs.somtoolbox.apps.helper.DataSetGenerator.DataPoint
 
getX() - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
 
getX(double) - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
Calculates a scaled x position of the label, by the given scale factor
getX() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellUnit
 
getX() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.TopographicProduct.DistanceTag
 
getX() - Method in class at.tuwien.ifs.somtoolbox.util.Point3d
 
getX() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
get/set Height/Width/X/Y: used for the bounding rectangle of the cluster.
getX() - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Node
 
getX1() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.Shift
 
getX2() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.Shift
 
getXdim() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.RhythmPattern
 
getXPos(int) - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
Returns an array of int values containing the horizontal positions of the the best-matching units of the input datum.
getXPos() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellUnit
 
getXPos() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Returns the horizontal position of this unit on the map it is part of.
getXPos(int) - Method in class at.tuwien.ifs.somtoolbox.util.mnemonic.MapPanel
 
getXSize() - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getXSize() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the number of units in horizontal direction.
getXSize() - Method in class at.tuwien.ifs.somtoolbox.layers.AdaptiveCoordinatesVirtualLayer
 
getXSize() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getXSize() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getXSize() - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the width of the map layer.
getY() - Method in class at.tuwien.ifs.somtoolbox.apps.helper.DataSetGenerator.DataPoint
 
getY() - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
 
getY(double) - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
Calculates a scaled y position of the label, by the given scale factor
getY() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellUnit
 
getY() - Method in class at.tuwien.ifs.somtoolbox.layers.quality.TopographicProduct.DistanceTag
 
getY() - Method in class at.tuwien.ifs.somtoolbox.util.Point3d
 
getY() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
get/set Height/Width/X/Y: used for the bounding rectangle of the cluster.
getY() - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Node
 
getY1() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.Shift
 
getY2() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.Shift
 
getYBaseline(FontMetrics) - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
Calculates the offset y position, considering font ascents.
getYBaseline(FontMetrics, double, int) - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
Calculates a scaled offset y position, considering font ascents.
getYdim() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.RhythmPattern
 
getYPos(int) - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
Returns an array of int values containing the vertical positions of the the best-matching units of the input datum.
getYPos() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellUnit
 
getYPos() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Returns the vertical position of this unit on the map it is part of.
getYPos(int) - Method in class at.tuwien.ifs.somtoolbox.util.mnemonic.MapPanel
 
getYSize() - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getYSize() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the number of units in vertical direction.
getYSize() - Method in class at.tuwien.ifs.somtoolbox.layers.AdaptiveCoordinatesVirtualLayer
 
getYSize() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getYSize() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getYSize() - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the height of the map layer.
getZ() - Method in class at.tuwien.ifs.somtoolbox.util.Point3d
 
getZPos(int) - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
Returns an array of int values containing the depth positions of the the best-matching units of the input datum.
getZPos() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Returns the depth position of this unit on the map it is part of.
getZSize() - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
getZSize() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns the number of units in depth.
getZSize() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
 
getZSize() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
getZSize() - Method in interface at.tuwien.ifs.somtoolbox.layers.Layer
Returns the depth of the map layer.
GGSOMTestRunResult - Class in at.tuwien.ifs.somtoolbox.reportgenerator
This class stores information about a training run that produced a SOM of type Growing Grid (gg) In addition to all features of the TestRunResultClass, it also prodived a tau2 (taken from the properties file)
GGSOMTestRunResult(TestRunResult) - Constructor for class at.tuwien.ifs.somtoolbox.reportgenerator.GGSOMTestRunResult
creates a new instance of this type, by handing over a TestRunResult object.
GGSOMTestRunResult(DatasetInformation, String, String, String, String, String, int, int) - Constructor for class at.tuwien.ifs.somtoolbox.reportgenerator.GGSOMTestRunResult
the explicit constructor for this object, that allows to define all required information separatly
GHSOM - Class in at.tuwien.ifs.somtoolbox.models
This class implements the Growing Hierarchical Self-Organizing Map.
GHSOM(int, boolean, GHSOMProperties, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.models.GHSOM
Constructs a new GHSOM with dim-dimensional weight vectors.
GHSOM(SOMInputReader) - Constructor for class at.tuwien.ifs.somtoolbox.models.GHSOM
Constructs an already trained GHSOM with a SOMInputReader provided by argument ir.
ghsom - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.GHSOMTestRunResult
 
GHSOM.ExpandedUnits - Class in at.tuwien.ifs.somtoolbox.models
 
GHSOM.ExpandedUnits() - Constructor for class at.tuwien.ifs.somtoolbox.models.GHSOM.ExpandedUnits
 
GHSOMHierarchyRoot - Class in at.tuwien.ifs.somtoolbox.models
A GHSOMLayer represents all GrowingLayers of a Level.
GHSOMHierarchyRoot(GrowingLayer) - Constructor for class at.tuwien.ifs.somtoolbox.models.GHSOMHierarchyRoot
 
GHSOMLevelLayer - Class in at.tuwien.ifs.somtoolbox.models
represents all layers of one level
GHSOMLevelLayer(GrowingLayer) - Constructor for class at.tuwien.ifs.somtoolbox.models.GHSOMLevelLayer
the constructor for the root-level
GHSOMLevelLayer(Vector<GrowingLayer>, int) - Constructor for class at.tuwien.ifs.somtoolbox.models.GHSOMLevelLayer
the constructor for any other level
GHSOMNavigationPanel - Class in at.tuwien.ifs.somtoolbox.apps.viewer.controls
A panel providing drill down and roll up features for a hierarchical growing som.
GHSOMNavigationPanel(CommonSOMViewerStateData, SOMPane) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.GHSOMNavigationPanel
Constructor.
GHSOMProperties - Class in at.tuwien.ifs.somtoolbox.properties
Properties for GHSOM training.
GHSOMProperties(String) - Constructor for class at.tuwien.ifs.somtoolbox.properties.GHSOMProperties
Loads and encapsulated properties for the GHSOM training process.
GHSOMSettingsPanel - Class in at.tuwien.ifs.somtoolbox.apps.trainer
 
GHSOMSettingsPanel() - Constructor for class at.tuwien.ifs.somtoolbox.apps.trainer.GHSOMSettingsPanel
 
GHSOMTestRunResult - Class in at.tuwien.ifs.somtoolbox.reportgenerator
 
GHSOMTestRunResult(TestRunResult) - Constructor for class at.tuwien.ifs.somtoolbox.reportgenerator.GHSOMTestRunResult
creates a new instance of this type, by handing over a TestRunResult object.
globalPreviousCurrentDir - Static variable in class at.tuwien.ifs.commons.gui.jsap.FileEditor
 
gr_activity - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ControlFrame
 
gradient - Variable in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
gradientColors - Variable in class at.tuwien.ifs.somtoolbox.visualization.ColorGradient
 
gradientPoints - Variable in class at.tuwien.ifs.somtoolbox.visualization.ColorGradient
 
Graph - Class in at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree
 
Graph(GrowingSOM) - Constructor for class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Graph
 
Gravity - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
 
GrayscaleGradient() - Static method in class at.tuwien.ifs.somtoolbox.visualization.ColorGradientFactory
 
grid - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ActivityGridModel
 
grid - Variable in class at.tuwien.ifs.somtoolbox.visualization.Snapper2D
 
grid - Variable in class at.tuwien.ifs.somtoolbox.visualization.Snapper3D
 
Grid - Class in at.tuwien.ifs.somtoolbox.visualization.thematicmap
 
Grid(Pnt, Pnt) - Constructor for class at.tuwien.ifs.somtoolbox.visualization.thematicmap.Grid
Creates a new instance of Grid
Grid(Pnt) - Constructor for class at.tuwien.ifs.somtoolbox.visualization.thematicmap.Grid
Creates a new instance of Grid
GRID_LAYOUT - Static variable in class at.tuwien.ifs.somtoolbox.input.SOMLibMapDescription
 
GRID_TOPOLOGY - Static variable in class at.tuwien.ifs.somtoolbox.input.SOMLibMapDescription
 
GridBagConstraintsIFS - Class in at.tuwien.ifs.somtoolbox.util
A helper class around GridBagConstraints, providing convenience methods to set locations, etc..
GridBagConstraintsIFS() - Constructor for class at.tuwien.ifs.somtoolbox.util.GridBagConstraintsIFS
New constraints top-left, top-alignment left.
GridBagConstraintsIFS(int, int) - Constructor for class at.tuwien.ifs.somtoolbox.util.GridBagConstraintsIFS
 
gridBagLayout1 - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ControlFrame
 
gridBagLayout1 - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.MultichannelPlaybackPanel
 
gridBagLayout2 - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.MultichannelPlaybackPanel
 
gridDiffs - Variable in class at.tuwien.ifs.somtoolbox.visualization.Snapper2D
 
gridLayout - Variable in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
gridLayout - Variable in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
gridLayout - Variable in class at.tuwien.ifs.somtoolbox.properties.SOMProperties
 
gridPlot(double[][][], String[][], double, double, double) - Method in class at.tuwien.ifs.somtoolbox.apps.UnitFileViewer
 
grids - Variable in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
GridSize - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
 
gridSize - Static variable in class at.tuwien.ifs.somtoolbox.visualization.Snapper3D
 
gridSums - Variable in class at.tuwien.ifs.somtoolbox.visualization.Snapper2D
 
gridTopology - Variable in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
gridTopology - Variable in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
gridTopology - Variable in class at.tuwien.ifs.somtoolbox.properties.SOMProperties
 
group - Variable in class at.tuwien.ifs.somtoolbox.summarisation.gui.SingleDocumentSummarisationPanel
 
GrowingCellDrawSurface - Class in at.tuwien.ifs.somtoolbox.util.growingCellStructures
Ermoeglicht das Zeichnen einer GrowingCellStructures waehrend des Trainings.
GrowingCellDrawSurface() - Constructor for class at.tuwien.ifs.somtoolbox.util.growingCellStructures.GrowingCellDrawSurface
 
GrowingCellLayer - Class in at.tuwien.ifs.somtoolbox.layers
 
GrowingCellLayer(int, boolean, long, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
Std.
GrowingCellStructures - Class in at.tuwien.ifs.somtoolbox.models
This class implements the Growing Cell Structures.
GrowingCellStructures(int, boolean, SOMProperties, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.models.GrowingCellStructures
Constructs a new GrowingCellStructures with dim-dimensional weight vectors.
GrowingCellStructuresMapOutputter - Class in at.tuwien.ifs.somtoolbox.output
FIXME: most of these methods can probably be unified with the methods in SOMLibMapOutputter.
GrowingCellStructuresMapOutputter() - Constructor for class at.tuwien.ifs.somtoolbox.output.GrowingCellStructuresMapOutputter
 
GrowingCellTetraheder - Class in at.tuwien.ifs.somtoolbox.util.growingCellStructures
A Tetraheder of 3 Cellstructures (for efficient adding and removing of units)
GrowingCellTetraheder(GrowingCellUnit, GrowingCellUnit, GrowingCellUnit) - Constructor for class at.tuwien.ifs.somtoolbox.util.growingCellStructures.GrowingCellTetraheder
Std Constructor, creates Tetraheder with Units c1,c2 and c3 (and connects them to this tetraheder)
GrowingCellUnit - Class in at.tuwien.ifs.somtoolbox.layers
Extension of Unit, needed to save additional data of growing cell structures
GrowingCellUnit(GrowingCellLayer, double[]) - Constructor for class at.tuwien.ifs.somtoolbox.layers.GrowingCellUnit
Std Constructor, initializes the unit wich weights
growingLayer - Variable in class at.tuwien.ifs.somtoolbox.apps.server.ServerSOM
 
growingLayer - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.CommonSOMViewerStateData
 
GrowingLayer - Class in at.tuwien.ifs.somtoolbox.layers
Implementation of a growing Self-Organizing Map layer that can also be static in size.
GrowingLayer(int, int, String, int, boolean, boolean, long, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Convenience constructor for top layer map of GHSOM or a single map.
GrowingLayer(int, int, int, String, int, boolean, boolean, long, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Convenience constructor for top layer map of GHSOM or a single map.
GrowingLayer(int, Unit, int, int, String, int, boolean, boolean, long, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Constructor for a new, untrained layer.
GrowingLayer(int, Unit, int, int, int, String, int, boolean, boolean, long, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Constructor for a new, untrained layer.
GrowingLayer(int, Unit, int, int, String, int, double[][][], long) - Constructor for class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Constructor for an already trained layer as specified by 2-dimensional array of d-dimensional weight vectors as argument vectors.
GrowingLayer(int, Unit, int, int, int, String, int, double[][][][], long) - Constructor for class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Constructor for an already trained layer as specified by 2-dimensional array of d-dimensional weight vectors as argument vectors.
GrowingLayer.Flip - Enum in at.tuwien.ifs.somtoolbox.layers
 
GrowingLayer.Flip() - Constructor for enum at.tuwien.ifs.somtoolbox.layers.GrowingLayer.Flip
 
GrowingLayer.Rotation - Enum in at.tuwien.ifs.somtoolbox.layers
 
GrowingLayer.Rotation() - Constructor for enum at.tuwien.ifs.somtoolbox.layers.GrowingLayer.Rotation
 
GrowingLayer.UpdaterThread - Class in at.tuwien.ifs.somtoolbox.layers
 
GrowingLayer.UpdaterThread(Unit, double, double, double[], Cuboid) - Constructor for class at.tuwien.ifs.somtoolbox.layers.GrowingLayer.UpdaterThread
 
growingSOM - Variable in class at.tuwien.ifs.somtoolbox.apps.server.ServerSOM
 
growingSOM - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.CommonSOMViewerStateData
 
GrowingSOM - Class in at.tuwien.ifs.somtoolbox.models
This class implements the Growing Self-Organizing Map.
GrowingSOM(Properties) - Constructor for class at.tuwien.ifs.somtoolbox.models.GrowingSOM
 
GrowingSOM(boolean, SOMProperties, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.models.GrowingSOM
Constructs a new GrowingSOM with dim-dimensional weight vectors.
GrowingSOM(int, int, int, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.models.GrowingSOM
Constructs and trains a new GrowingSOM.
GrowingSOM(int, int, int, String, int, boolean, boolean, int, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.models.GrowingSOM
Constructs and trains a new GrowingSOM.
GrowingSOM(int, Unit, int, boolean, SOMProperties, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.models.GrowingSOM
Constructs a new GrowingSOM with dim-dimensional weight vectors.
GrowingSOM(int, Unit, SOMInputReader) - Constructor for class at.tuwien.ifs.somtoolbox.models.GrowingSOM
Private constructor used recursively in hierarchical network models consisting of multiple maps.
GrowingSOM(int, Unit, SOMInputReader, GrowingLayer) - Constructor for class at.tuwien.ifs.somtoolbox.models.GrowingSOM
 
GrowingSOM(SOMInputReader) - Constructor for class at.tuwien.ifs.somtoolbox.models.GrowingSOM
Constructs an already trained GrowingSOM with a SOMInputReader provided by argument ir.
GrowingSOM() - Constructor for class at.tuwien.ifs.somtoolbox.models.GrowingSOM
only used for subclassing
GrowingSOM.IntermediateSOMDumper - Class in at.tuwien.ifs.somtoolbox.models
 
GrowingSOM.IntermediateSOMDumper(FileProperties) - Constructor for class at.tuwien.ifs.somtoolbox.models.GrowingSOM.IntermediateSOMDumper
 
GrowingSOMSettingsPanel - Class in at.tuwien.ifs.somtoolbox.apps.trainer
 
GrowingSOMSettingsPanel() - Constructor for class at.tuwien.ifs.somtoolbox.apps.trainer.GrowingSOMSettingsPanel
 
growthQualityMeasureName - Variable in class at.tuwien.ifs.somtoolbox.properties.SOMProperties
 
growthQualityMeasureName() - Method in class at.tuwien.ifs.somtoolbox.properties.SOMProperties
Returns the name of the used quality measure.
gsom - Variable in class at.tuwien.ifs.somtoolbox.apps.SDHTrainingSequenceGenerator
 
gsom - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.MultichannelPlaybackPanel
 
gsom - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
gsom - Variable in class at.tuwien.ifs.somtoolbox.visualization.FlowBorderlineVisualizer
 
gsom - Variable in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
gsom - Variable in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Graph
 
gsom1 - Variable in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
gsom2 - Variable in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
gunzip(String) - Static method in class at.tuwien.ifs.somtoolbox.util.FileUtils
 
gunzip(String, String) - Static method in class at.tuwien.ifs.somtoolbox.util.FileUtils
 

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