A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _

A

A_FINDME_FILES - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.Commons
 
aabMuted - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ActivityGridModel
True for the respective cell if this speaker is currently muted (eg waiting for decoding)
aabMuted - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.MyGridCellRenderer
Flags that determine whether the respective speaker is currently muted and therefore should get another background colour
aasFirstLine - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ActivityGridModel
Contains names of mixer
aasSecondLine - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ActivityGridModel
Contains song names, is set via method call
aasToopTips - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.LayoutTable
 
aavGPNs - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.LayoutTable
 
aavGPNs - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.MultichannelPlaybackPanel
Stores the assignments for each cell of the layout table.
absolute - Variable in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
absoluteToolTip - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ShiftsControlPanel
 
absPathVectors - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractSelectionPanel
 
AbstractBackgroundImageVisualizer - Class in at.tuwien.ifs.somtoolbox.visualization
This class provides basic support for classes implementing BackgroundImageVisualizer.
AbstractBackgroundImageVisualizer() - Constructor for class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
Initialises the control panel, if GraphicsEnvironment.isHeadless() reports to be in a non-headless environment.
AbstractBackgroundImageVisualizer.ContourInterpolationMode - Enum in at.tuwien.ifs.somtoolbox.visualization
 
AbstractBackgroundImageVisualizer.ContourInterpolationMode() - Constructor for enum at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer.ContourInterpolationMode
 
AbstractBackgroundImageVisualizer.ContourMode - Enum in at.tuwien.ifs.somtoolbox.visualization
 
AbstractBackgroundImageVisualizer.ContourMode() - Constructor for enum at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer.ContourMode
 
AbstractBackgroundImageVisualizer.VisualizationControlPanel - Class in at.tuwien.ifs.somtoolbox.visualization
A basic visualisation control panel, providing a JSpinner to control the opacity.
AbstractBackgroundImageVisualizer.VisualizationControlPanel(String) - Constructor for class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer.VisualizationControlPanel
Constructs a new VisualizationControlPanel with a specific name, using a GridBagLayout,.
AbstractDragSequenceEventHandler - Class in at.tuwien.ifs.somtoolbox.apps.viewer.handlers
An abstract sequence handler that implements common tasks as drag start an drag activity step methods.
AbstractDragSequenceEventHandler() - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.handlers.AbstractDragSequenceEventHandler
 
AbstractItemVisualizer - Class in at.tuwien.ifs.somtoolbox.visualization
An abstract visualiser that displays properties of a single selected item, e.g.
AbstractItemVisualizer() - Constructor for class at.tuwien.ifs.somtoolbox.visualization.AbstractItemVisualizer
 
AbstractItemVisualizer.AbstractSelectedItemVisualizerControlPanel - Class in at.tuwien.ifs.somtoolbox.visualization
A base class for a control panel allowing selection of a single item.
AbstractItemVisualizer.AbstractSelectedItemVisualizerControlPanel(String) - Constructor for class at.tuwien.ifs.somtoolbox.visualization.AbstractItemVisualizer.AbstractSelectedItemVisualizerControlPanel
 
AbstractLabeler - Class in at.tuwien.ifs.somtoolbox.output.labeling
This class provides basic functionality all Labelers can use.
AbstractLabeler() - Constructor for class at.tuwien.ifs.somtoolbox.output.labeling.AbstractLabeler
 
AbstractMatrixVisualizer - Class in at.tuwien.ifs.somtoolbox.visualization
 
AbstractMatrixVisualizer() - Constructor for class at.tuwien.ifs.somtoolbox.visualization.AbstractMatrixVisualizer
 
AbstractMemoryInputVectorDistanceMatrix - Class in at.tuwien.ifs.somtoolbox.data.distance
This implementation stores the distances in memory.
AbstractMemoryInputVectorDistanceMatrix(InputData, DistanceMetric) - Constructor for class at.tuwien.ifs.somtoolbox.data.distance.AbstractMemoryInputVectorDistanceMatrix
Constructs the distance matrix by computing the distances on the fly.
AbstractMemoryInputVectorDistanceMatrix(String) - Constructor for class at.tuwien.ifs.somtoolbox.data.distance.AbstractMemoryInputVectorDistanceMatrix
Reads the distance matrix from an ASCII file, and stores it in memory.
AbstractMetric - Class in at.tuwien.ifs.somtoolbox.layers.metrics
Implements a static method for metric instantiation and a method for mean vector calculation.
AbstractMetric() - Constructor for class at.tuwien.ifs.somtoolbox.layers.metrics.AbstractMetric
 
AbstractNetworkModel - Class in at.tuwien.ifs.somtoolbox.models
This class provides basic support for implementing a NetworkModel.
AbstractNetworkModel() - Constructor for class at.tuwien.ifs.somtoolbox.models.AbstractNetworkModel
 
AbstractNormaliser - Class in at.tuwien.ifs.somtoolbox.data.normalisation
 
AbstractNormaliser() - Constructor for class at.tuwien.ifs.somtoolbox.data.normalisation.AbstractNormaliser
 
AbstractOptionFactory - Class in at.tuwien.ifs.somtoolbox.apps.config
 
AbstractOptionFactory() - Constructor for class at.tuwien.ifs.somtoolbox.apps.config.AbstractOptionFactory
 
AbstractOptionFactory.FieldComparator - Class in at.tuwien.ifs.somtoolbox.apps.config
 
AbstractOptionFactory.FieldComparator() - Constructor for class at.tuwien.ifs.somtoolbox.apps.config.AbstractOptionFactory.FieldComparator
 
AbstractOptionFactory.MethodComparator - Class in at.tuwien.ifs.somtoolbox.apps.config
 
AbstractOptionFactory.MethodComparator() - Constructor for class at.tuwien.ifs.somtoolbox.apps.config.AbstractOptionFactory.MethodComparator
 
AbstractQualityMeasure - Class in at.tuwien.ifs.somtoolbox.layers.quality
Provides basic functionality for quality measure algorithms.
AbstractQualityMeasure(Layer, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.layers.quality.AbstractQualityMeasure
 
AbstractSelectionPanel - Class in at.tuwien.ifs.somtoolbox.apps.viewer.controls
 
AbstractSelectionPanel(LayoutManager, CommonSOMViewerStateData, String) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractSelectionPanel
 
AbstractSelectionPanel(LayoutManager, CommonSOMViewerStateData, String, int) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractSelectionPanel
 
AbstractSOMInputReader - Class in at.tuwien.ifs.somtoolbox.input
Provides generic functionality to read a saved network model.
AbstractSOMInputReader() - Constructor for class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
AbstractSOMInputReader.UnitInformation - Class in at.tuwien.ifs.somtoolbox.input
Inner class holding the information about a specific unit.
AbstractSOMInputReader.UnitInformation() - Constructor for class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader.UnitInformation
Sole constructor.
AbstractSOMInputReader.UnitInformation(int) - Constructor for class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader.UnitInformation
 
AbstractSOMLibSparseInputData - Class in at.tuwien.ifs.somtoolbox.data
This abstract implementation provides basic support for operating on a InputData.
AbstractSOMLibSparseInputData(String[], int, boolean, Random, TemplateVector, SOMLibClassInformation) - Constructor for class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
AbstractSOMLibSparseInputData(boolean, Random) - Constructor for class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
AbstractSOMLibSparseInputData() - Constructor for class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
AbstractSOMLibTemplateVector - Class in at.tuwien.ifs.somtoolbox.data
This abstract implementation provides basic support for operating on a TemplateVector.
AbstractSOMLibTemplateVector() - Constructor for class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibTemplateVector
 
AbstractVectorMetaData - Class in at.tuwien.ifs.somtoolbox.data.metadata
 
AbstractVectorMetaData() - Constructor for class at.tuwien.ifs.somtoolbox.data.metadata.AbstractVectorMetaData
 
AbstractViewerControl - Class in at.tuwien.ifs.somtoolbox.apps.viewer.controls
This class implements basic functionality for a control panel in the SOMViewer application.
AbstractViewerControl(String, CommonSOMViewerStateData) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractViewerControl
Creates a new instance with the given title.
AbstractViewerControl(String, CommonSOMViewerStateData, LayoutManager) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractViewerControl
Creates a new instance with the given title and layout.
AbstractWardsLinkageTreeBuilder - Class in at.tuwien.ifs.somtoolbox.visualization.clustering
 
AbstractWardsLinkageTreeBuilder() - Constructor for class at.tuwien.ifs.somtoolbox.visualization.clustering.AbstractWardsLinkageTreeBuilder
 
AbstractWeightedMetric - Class in at.tuwien.ifs.somtoolbox.layers.metrics
 
AbstractWeightedMetric() - Constructor for class at.tuwien.ifs.somtoolbox.layers.metrics.AbstractWeightedMetric
 
AC_DRILL_DOWN - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.GHSOMNavigationPanel
The zoom in action command.
AC_ROLL_UP - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.GHSOMNavigationPanel
The zoom out action command.
accept(File) - Method in class at.tuwien.ifs.commons.util.io.ExtensionFileFilterSwing
 
accept(File) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.MySOMVisualisationDataFileFilter
 
accept(File) - Method in class at.tuwien.ifs.somtoolbox.util.FileUtils.SOMDescriptionFileFilter
 
ACT_NEXT - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayerControl
 
ACT_PLAY - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayerControl
 
ACT_PREV - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayerControl
 
ACT_STOP - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayerControl
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ColorCellEditor
Handles events from the editor button and from the dialog's OK button.
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ComponentPlaneClusteringFrame
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ComparisonPanel
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.GHSOMNavigationPanel
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ControlFrame_btn_pause_actionAdapter
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ControlFrame_btn_stop_actionAdapter
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.MultichannelPlaybackPanel
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PlaySOMPanel
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.QuerySOMPanel
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ShiftsControlPanel
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ExportDialog
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.LabellingDialog
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SharedSOMVisualisationDataDialog.ClearButtonActionListener
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SharedSOMVisualisationDataDialog.LoadButtonActionListener
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SharedSOMVisualisationDataDialog.PrefixBrowseActionListener
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SharedSOMVisualisationDataDialog.PrefixClearActionListener
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SharedSOMVisualisationDataDialog.ReloadButtonActionListener
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SharedSOMVisualisationDataDialog.SecondSOMClearActionListener
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SharedSOMVisualisationDataDialog.SecSOMBrowseActionListener
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer.CalculateFeatureWeightsActionListener
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer.ClusteringMenuItemActionListener
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer.MyJCheckBoxMenuItem
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer.PaletteCheckboxMenuItemListener
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer.VisualizationActionListener
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.MultiDocumentSummarisationPanel
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.SingleDocumentSummarisationPanel
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.summarisation.SummariserGUI
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractItemVisualizer.AbstractSelectedItemVisualizerControlPanel
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.visualization.ComparisonVisualizer.ComparisonControlPanel
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer.MetroMapControlPanel
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.visualization.RhythmPatternsAttributeVisualizer
 
actionPerformed(ActionEvent) - Method in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer.ClassVisControlPanel
 
ActivityGrid - Class in at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback
Description: For use in ControlFrame.
ActivityGrid(ActivityGridModel) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ActivityGrid
We need the GridModel here already because we need the numbers of rows and cols and we handle over the boolean array aabMuted to the costum CellRenderer
ActivityGridModel - Class in at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback
 
ActivityGridModel(TableModel) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ActivityGridModel
Creates the model with the same dimensions as the given model
ActivityHistogram - Class in at.tuwien.ifs.somtoolbox.visualization
This is the implementation of an Activity Histogram.
FIXME: there are a lot of common parts with ComponentPlanesVisualizer ==> make a superclass for both of them.
ActivityHistogram() - Constructor for class at.tuwien.ifs.somtoolbox.visualization.ActivityHistogram
 
ActivityHistogram.ActivityHistrogramControlPanel - Class in at.tuwien.ifs.somtoolbox.visualization
Implements the control UI for this visualisation.
ActivityHistogram.ActivityHistrogramControlPanel(ActivityHistogram, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.visualization.ActivityHistogram.ActivityHistrogramControlPanel
 
actmod - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.MultichannelPlaybackPanel
 
adaptee - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ControlFrame_btn_pause_actionAdapter
 
adaptee - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ControlFrame_btn_stop_actionAdapter
 
ADAPTIVE_COORDINATES - Static variable in class at.tuwien.ifs.somtoolbox.data.SOMVisualisationData
 
ADAPTIVE_COORDINATES_THRESHOLD - Static variable in class at.tuwien.ifs.somtoolbox.input.SOMLibMapDescription
 
adaptiveCoordinatesThreshold - Variable in class at.tuwien.ifs.somtoolbox.properties.SOMProperties
 
adaptiveCoordinatesTreshold() - Method in class at.tuwien.ifs.somtoolbox.properties.SOMProperties
 
AdaptiveCoordinatesVirtualLayer - Class in at.tuwien.ifs.somtoolbox.layers
 
AdaptiveCoordinatesVirtualLayer(int, int, double...) - Constructor for class at.tuwien.ifs.somtoolbox.layers.AdaptiveCoordinatesVirtualLayer
 
AdaptiveCoordinatesVirtualLayer(String) - Constructor for class at.tuwien.ifs.somtoolbox.layers.AdaptiveCoordinatesVirtualLayer
 
AdaptiveCoordinatesVirtualUnit - Class in at.tuwien.ifs.somtoolbox.layers
A virtual unit for the adaptive coordinates visualisation.
AdaptiveCoordinatesVirtualUnit(double, double) - Constructor for class at.tuwien.ifs.somtoolbox.layers.AdaptiveCoordinatesVirtualUnit
 
AdaptiveCoordinatesVirtualUnit() - Constructor for class at.tuwien.ifs.somtoolbox.layers.AdaptiveCoordinatesVirtualUnit
 
AdaptiveCoordinatesVisualizer - Class in at.tuwien.ifs.somtoolbox.visualization
Implementation of the adaptive coordinates method.
AdaptiveCoordinatesVisualizer() - Constructor for class at.tuwien.ifs.somtoolbox.visualization.AdaptiveCoordinatesVisualizer
 
AdaptiveCoordinatesVisualizer.AdaptiveCoordinatesControlPanel - Class in at.tuwien.ifs.somtoolbox.visualization
 
AdaptiveCoordinatesVisualizer.AdaptiveCoordinatesControlPanel() - Constructor for class at.tuwien.ifs.somtoolbox.visualization.AdaptiveCoordinatesVisualizer.AdaptiveCoordinatesControlPanel
 
AdaptiveStdErrProgressWriter - Class in at.tuwien.ifs.somtoolbox.util
 
AdaptiveStdErrProgressWriter(int, String) - Constructor for class at.tuwien.ifs.somtoolbox.util.AdaptiveStdErrProgressWriter
 
AdaptiveStdErrProgressWriter(int, String, int) - Constructor for class at.tuwien.ifs.somtoolbox.util.AdaptiveStdErrProgressWriter
 
AdaptiveStdErrProgressWriter(int, String, int, int) - Constructor for class at.tuwien.ifs.somtoolbox.util.AdaptiveStdErrProgressWriter
 
adaptiveXPos - Variable in class at.tuwien.ifs.somtoolbox.layers.AdaptiveCoordinatesVirtualUnit
 
adaptiveYPos - Variable in class at.tuwien.ifs.somtoolbox.layers.AdaptiveCoordinatesVirtualUnit
 
adaptPlayButton(String) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayerControl
 
add(Component) - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
add(Component, Object) - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
add(Component, int) - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
add(Component, Object, int) - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
add(String, Component) - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
add(AbstractViewerControl) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ControlCollector
Deprecated. use ControlCollector.addControl(AbstractViewerControl, boolean) directly.
add(TitledCollapsiblePanel) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ControlCollector
Deprecated. 
add(TitledCollapsiblePanel, Object) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ControlCollector
Deprecated. 
add(AbstractViewerControl, Object) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ControlCollector
Deprecated. use ControlCollector.addControl(AbstractViewerControl, boolean) directly.
add(double[], double[]) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
 
add(int[], int[]) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
 
add(Pnt) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
ADD_SOMS - Variable in class at.tuwien.ifs.somtoolbox.visualization.ComparisonVisualizer.ComparisonControlPanel
 
addAll(GHSOM.ExpandedUnits) - Method in class at.tuwien.ifs.somtoolbox.models.GHSOM.ExpandedUnits
 
addAllSongs(List<String>) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
addAllSongs(List<String>, List<File>) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
addArrow(ArrowPNode) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
addAttractingForce(GrowingCellUnit, GrowingCellUnit, double[]) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
Calculate the attracting force between unitToMove and unitForcing and store it in attractingForce
addBatchSomNeighbour(InputDatum) - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
 
addChangeListener(ChangeListener) - Method in class at.tuwien.ifs.somtoolbox.util.mnemonic.MapPanel
 
addClass(SemanticClass) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticNode
 
addClasstoGrid(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
adds a class from ClassCointainer to this SemanticClass Hashmap, used if the Grid is non Regular
addComputedInputCorrection(Unit, Unit, String, InputCorrections) - Method in class at.tuwien.ifs.somtoolbox.input.InputCorrections
 
addConcentrationMix(double[]) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticClass
 
addControl(TitledCollapsiblePanel) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ControlCollector
Deprecated. use ControlCollector.addControl(AbstractViewerControl, boolean) instead.
addControl(AbstractViewerControl) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ControlCollector
 
addControl(AbstractViewerControl, boolean) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ControlCollector
 
addControl(AbstractViewerControl, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ControlCollector
 
addControl(AbstractViewerControl, int, boolean) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.ControlCollector
 
addDataChildren() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
addDataFile(JSAPResult, String) - Method in class at.tuwien.ifs.somtoolbox.apps.helper.SomFilePacker
 
addDataFiles(String, String) - Method in class at.tuwien.ifs.somtoolbox.apps.helper.SomFilePacker
 
addDataFiles(String) - Method in class at.tuwien.ifs.somtoolbox.apps.helper.SomFilePacker
 
addDimension(int, int, double[][][]) - Static method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
addEditLabelEventListenerToAll() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusteringTree
Adds the EditLabelEventLister to all Labels.
addIndex(int) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.Cluster
Add the index of a data point to this cluster.
addInput(InputDatum) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.InputQEContainer
add a new input datum to the container
addInstance(int, String) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibSparseInputData
 
addItem(String, String) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
 
addItem(String, String, String) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibDataInformation
 
addLabelsToXml(Iterator<?>, Node, Document) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.LabelXmlUtils
 
addLayer(PLayer) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.MapOverviewPane.MapOverviewCanvas
Add a layer to list of viewed layers
addLayerFrame(GrowingLayer) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.GHSOMNavigationPanel
 
addListDataListener(ListDataListener) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.LineListModel
addListDataListener
addListScrollPanels(GridBagConstraints) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractSelectionPanel
 
addManualInputCorrection(Unit, Unit, String) - Method in class at.tuwien.ifs.somtoolbox.input.InputCorrections
 
addMappedInput(String, Double) - Method in class at.tuwien.ifs.somtoolbox.layers.InputContainer
Adds an input datum defined by argument name and distance to the list.
addMappedInput(String, Double) - Method in class at.tuwien.ifs.somtoolbox.layers.MappedInputs
Adds an input datum defined by argument name and distance to the list.
addMappedInput(InputDatum, boolean) - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Adds a single input datum to the unit.
addMappedInput(InputData, boolean) - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Map all the input vectors contained in specified InputData object onto this unit.
addMappedInput(String, double, boolean) - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Convenience method to add an input datum specified by its name and distance.
addMapUnit(Unit) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.InputQEContainer
adds a unit to this container
addMP3PlayerListener(PlayerListener) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.AudioPlayer
 
addNewRegion(Unit) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.RegionManager
 
addNode(SemanticNode) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticClass
 
addPalette(Palette) - Static method in class at.tuwien.ifs.somtoolbox.visualization.Palettes
 
addParameter(TitledCollapsiblePanel, Parameter, JSAPResult) - Method in class at.tuwien.ifs.commons.gui.jsap.GenericGUI
 
addPath(String, Color) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector.UserTableModel
 
addPath(String) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector.UserTableModel
 
addPlaybackListener(PlaybackListener) - Method in class at.tuwien.ifs.somtoolbox.audio.PlaybackThread
 
addPlayerListener(PlayerListener) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
addPlayerListener(PlayerListener) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlaySOMPlayer
 
addPlayListListener(PlayListListener) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
addPlayListListener(PlayListListener) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlaySOMPlayer
 
addProperty(Object, Object) - Method in class at.tuwien.ifs.somtoolbox.data.InputDatum
Adds an arbitrary key/value property to the InputDatum.
addRegionMix(int[]) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticClass
 
addRepellingForce(GrowingCellUnit, GrowingCellUnit, double[]) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
Calculate the repelling force between unitToMove and unitForcing and store it in force
addSegment(Segment) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
addSingleListScrollPanel(Object) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractSelectionPanel
 
addSOM(String) - Method in class at.tuwien.ifs.somtoolbox.visualization.ComparisonVisualizer
 
addSOMs() - Method in class at.tuwien.ifs.somtoolbox.visualization.ComparisonVisualizer.ComparisonControlPanel
 
addSong(String, File) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
addSong(String) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
addSong(String, File, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
addSong(String, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
addSong(String) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.PlayList
adds a song to the playlist
addSongs(int, String[]) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.TPlaybackThreadDataRecord
 
addSongs(int, String[]) - Method in class at.tuwien.ifs.somtoolbox.audio.PlaybackThreadDataRecord
 
addStylesToDocument(StyledDocument, Color[]) - Method in class at.tuwien.ifs.somtoolbox.summarisation.output.DocumentDisplayer
 
addTestrunPane() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
inserts a new panel for specifying information about a testrun to the testrunScrollerContent pane
addTestrunResult(TestRunResult) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResultCollection
 
addTextToLabel(PNode, String, int, double, double) - Static method in class at.tuwien.ifs.somtoolbox.util.LabelPNodeGenerator
Adds an additional line of text to the label.
addToList(String, Unit) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractSelectionPanel
adds an element to the current playlist and the absPathVectors
addToList(String, String, Unit) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractSelectionPanel
adds an element to the current playlist and the absPathVectors
addToList(String, Unit) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlaySOMPlayer
 
addToList(String, String, Unit) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlaySOMPlayer
 
addToolTip - Static variable in class at.tuwien.ifs.somtoolbox.visualization.ComparisonVisualizer.ComparisonControlPanel
 
addUnit(Unit, double) - Method in class at.tuwien.ifs.somtoolbox.models.GHSOM.ExpandedUnits
 
addVec(double[], double[]) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.InversionMeasure
 
addVis(String, String, String, StringBuffer) - Method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
addVisualizationChangeListener(VisualizationChangeListener) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
ADJACENT - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.ArrowPNode
 
ADJACENT - Static variable in class at.tuwien.ifs.somtoolbox.visualization.comparison.Shift
 
adjacentArrows - Variable in class at.tuwien.ifs.somtoolbox.visualization.comparison.QuiverPNode
 
adjacentArrowsOn() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.QuiverPNode
 
adjacentCB - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ShiftsControlPanel
 
ADJACENTCOLOR - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.ArrowPNode
 
ADJECTIVE - Static variable in class at.tuwien.ifs.somtoolbox.summarisation.methods.PartOfSpeech
 
adjList - Variable in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Graph
 
aEmpty - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.PlaybackThread
Flag if channel is empty: in this case, there will be silence on the respective channel
aFiles - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.PlaybackThread
Files to play
aggregateLines(double[][][], int, DistanceFunctionType) - Static method in class at.tuwien.ifs.somtoolbox.apps.SecondLifeFileReaderMain
 
aggregationMode - Variable in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
aggregationSimilarity - Variable in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
aggregationTargetNumberOfComponents - Variable in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
ain - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.PlaybackThread
 
algorithm - Variable in class at.tuwien.ifs.somtoolbox.summarisation.gui.MultiDocumentSummarisationPanel
 
algorithm - Variable in class at.tuwien.ifs.somtoolbox.summarisation.gui.SingleDocumentSummarisationPanel
 
ALL - Static variable in class at.tuwien.ifs.somtoolbox.summarisation.parser.Scorer
 
allClusteringElements - Variable in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusteringTree
contains all currently shown clustering layers
allDirections - Variable in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
allIntegers - Variable in class at.tuwien.ifs.somtoolbox.util.StringIntegerComparator
 
allItems - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.handlers.LineSelectionEventHandler
 
allMeasuresBoxes - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
allowAborting() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.TreeBuilder
 
ALLOWED_FILE_ENDINGS - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.MIMETypes
 
allowedNodeTypes - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.handlers.AbstractDragSequenceEventHandler
Define what values for the PNode.getAttribute(Object) are acceptable to select a PNode for dragging.
allowMoveDown - Variable in class at.tuwien.ifs.somtoolbox.apps.server.SOMPageParameters
 
allowMoveLeft - Variable in class at.tuwien.ifs.somtoolbox.apps.server.SOMPageParameters
 
allowMoveRight - Variable in class at.tuwien.ifs.somtoolbox.apps.server.SOMPageParameters
 
allowMoveUp - Variable in class at.tuwien.ifs.somtoolbox.apps.server.SOMPageParameters
 
allPoints - Variable in class at.tuwien.ifs.somtoolbox.apps.helper.DataSetGenerator
 
allresultdoc - Variable in class at.tuwien.ifs.somtoolbox.summarisation.output.ResultHandler
 
allresultscores - Variable in class at.tuwien.ifs.somtoolbox.summarisation.output.ResultHandler
 
allscores - Variable in class at.tuwien.ifs.somtoolbox.summarisation.output.MultiDocumentHandler
 
allscores - Variable in class at.tuwien.ifs.somtoolbox.summarisation.output.ResultHandler
 
allSOMCoordinates - Variable in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
Array of all points on the SOM .
allSOMCoordinatesDiffValues - Variable in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
Similar matrix as MetroMapVisualizer.allSOMCoordinatesSumValues, but containing the difference of the X&Y coordinates, for upper-left and lower-right diagonal units.
allSOMCoordinatesSumValues - Variable in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
Lookup-up matrix to check fast if two points are on a diagonal to each other.
allVectorNames - Variable in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
alpha - Variable in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
Reduction Factor for signal counter
alpha - Variable in class at.tuwien.ifs.somtoolbox.layers.metrics.LnAlphaMetric
 
alpha - Static variable in class at.tuwien.ifs.somtoolbox.models.GrowingCellStructures
 
alreadySelected(Object) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.handlers.OrderedPSelectionEventHandler
check if an object has already been selected or not
aMixer - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.LineListModel
 
analyse(String, List<String>) - Method in interface at.tuwien.ifs.somtoolbox.apps.analysis.PLAnalyser
Analyze the playlist
analyse(File, boolean) - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PlaylistAnalysis
 
analyse(File[], boolean) - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PlaylistAnalysis
 
analyse(String, List<String>) - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PLClusterSpaceAnalyser
 
analyse(String, List<String>) - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PLInputSpaceAnalyser
 
analyse(String, List<String>) - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PLOutputSpaceAnalyser
 
analyse(String, List<String>) - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PLStepSequenceAnalyser
 
analyseDir(File, boolean) - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PlaylistAnalysis
 
analysers - Variable in class at.tuwien.ifs.somtoolbox.apps.analysis.PlaylistAnalysis
 
analyzeDimension(GrowingCellUnit[][], int[]) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
Analyses maximum extension of the Units in data and their offset
analyzeDimension(List<GrowingCellUnit>, int[]) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
Analyses maximum extension of the Units in units and their offset
angle(Pnt) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
aPos - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.PlaybackThread
 
app - Variable in class at.tuwien.ifs.commons.gui.SOMToolboxAppChooser.MainRadioButton.MainRadioButtonModel
 
APP_ICON - Static variable in class at.tuwien.ifs.somtoolbox.util.mnemonic.MnemonicSOMGenerator
 
APP_NAME - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.Commons
 
appendExtension(String, String) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
 
appendLatexOutput(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.output.ReportFileWriter
writes the string to the file, but first replaces some characters to their fitting latex representation
appendOrReplaceExtension(String, String, String) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
 
appendOutput(String) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.output.ReportFileWriter
write the given output to the file
appendOutput(StringBuilder) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.output.ReportFileWriter
write the given content to the file
appendToCacheKey(GrowingSOM, int, int, int, Object...) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.feature.evaluation.SimilarityRetrieval
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.feature.evaluation.SimilarityRetrievalGUI
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.DataSetViewer
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.helper.DataMapper
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.helper.DatasetRandomiser
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.helper.DataWinnerMappingWriter
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.helper.MapRotator
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.helper.RGBPaletteConverter
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.helper.SomFilePacker
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.helper.SOMLibInputMerger
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.helper.SOMMerger
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.helper.StringReplacer
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.helper.TemplateVectorComparator
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.helper.VectorFileMerger
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.QualityMeasureComputer
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.UnitFileViewer
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.apps.VisualisationImageSaver
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.data.distance.DistanceMatrixWriter
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.data.InputDataFileFormatConverter
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.data.SOMLibVectorNormalization
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.data.SOMLibZeroVectorRemover
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.database.VectorFile2DatabaseImporter
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.input.MapFileFormatConverter
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.models.GHSOM
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.models.GrowingSOM
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.models.MnemonicSOM
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.output.AttendeeMapper
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.output.HTMLOutputter
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.output.labeling.LabelSOM
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.output.TrajectoryOutputter
 
APPLICATION_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.util.mnemonic.MnemonicSOMGenerator
 
applicationDirectory - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
applicationPath - Variable in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
applicationTypePanels - Variable in class at.tuwien.ifs.commons.gui.SOMToolboxAppChooser
 
apply(double, double) - Method in class at.tuwien.ifs.somtoolbox.layers.metrics.L2Metric.L2MetricMatrix
 
apply(double) - Method in class at.tuwien.ifs.somtoolbox.layers.metrics.L2Metric.L2MetricMatrix
 
apply(double, double) - Method in class at.tuwien.ifs.somtoolbox.layers.metrics.LnMetric.LnMetricMatrix
 
applyColourWeighting(GrowingSOM, int, int, BufferedImage, Graphics2D) - Method in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer
 
applyMovement(double, double) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingCellUnit
 
applyNameFix(String) - Static method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
small helper method for getTrainingDataInfo
applyTSP - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AutoRoutePanel
 
aPtdata - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.MultichannelPlaybackPanel
Is created and filled when parsing layout table
area - Variable in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
areaLineDistance(Point2D[], Point2D[]) - Static method in class at.tuwien.ifs.somtoolbox.clustering.functions.ComponentLine2DDistance
Computes the distance between two lines by computing the area stretching between them.
areaLineDistance(Point3d[], Point3d[]) - Static method in class at.tuwien.ifs.somtoolbox.clustering.functions.ComponentLine3DDistance
Computes the distance between two lines by computing the area stretching between them.
areaSelection - Variable in class at.tuwien.ifs.somtoolbox.apps.server.SOMPageParameters
 
areaVisiblePNode - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.MapOverviewPane.MapOverviewCanvas
This is the node that shows the viewed area.
ARFFFormatInputData - Class in at.tuwien.ifs.somtoolbox.data
Reads input data from a WEKA ARFF File Format.
ARFFFormatInputData(String) - Constructor for class at.tuwien.ifs.somtoolbox.data.ARFFFormatInputData
 
ARFFFormatInputData(String, boolean, boolean, int, long) - Constructor for class at.tuwien.ifs.somtoolbox.data.ARFFFormatInputData
 
argList - Variable in class at.tuwien.ifs.commons.gui.jsap.GenericGUI
 
args - Variable in class at.tuwien.ifs.commons.gui.SOMToolboxAppChooser
 
args - Static variable in class at.tuwien.ifs.somtoolbox.apps.initEval.EvaluationMain
 
ArrayUtils - Class in at.tuwien.ifs.somtoolbox.util
Class gathering utilities related to Arrays.
ArrayUtils() - Constructor for class at.tuwien.ifs.somtoolbox.util.ArrayUtils
 
arrow - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.ArrowPNode
 
arrowHeadLength - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.ArrowPNode
 
arrowHeadScale - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.ArrowPNode
 
arrowHeadWidth - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.ArrowPNode
 
ArrowPNode - Class in at.tuwien.ifs.somtoolbox.apps.viewer
Class for arrows on the SOM Visualization (that indicate shifts in a SOM)
ArrowPNode(Point, Point, double, double) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.ArrowPNode
 
ArrowPNode(double, double, double, double) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.ArrowPNode
Constructor that takes arrow coordinates
ArrowPNode(InputCorrections.CreationType, String[][], String, Color, double, double, Point, Point) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.ArrowPNode
 
arrowsFromThisUnit - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
asBufferedImage(ClassColorTableModel) - Static method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
asBufferedImage(ClassColorTableModel, boolean) - Static method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
asBufferedImage() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ColourLegendTable
Deprecated.  
asdf(double, double, double) - Static method in class at.tuwien.ifs.somtoolbox.layers.initialisation.SOMInitializer
 
aspectRatio - Variable in class at.tuwien.ifs.somtoolbox.util.mnemonic.MapPanel
 
assertEqual(Object, Object, Object) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
assignClassGrids() - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
assignClassGrids(SOMClass, Segment, double, double, double) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
AssignContourValues() - Method in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
interpolate between ContourPlot.zMin and ContourPlot.zMax, logarithmically or linearly, in order to assign contour values to the array ContourPlot.cv
ASSIGNMENT_FILEFILTER - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.Commons
 
at.tuwien.ifs.commons.gui - package at.tuwien.ifs.commons.gui
 
at.tuwien.ifs.commons.gui.controls - package at.tuwien.ifs.commons.gui.controls
 
at.tuwien.ifs.commons.gui.controls.swing.table - package at.tuwien.ifs.commons.gui.controls.swing.table
 
at.tuwien.ifs.commons.gui.jsap - package at.tuwien.ifs.commons.gui.jsap
This package contains a GenericGUI for JSAP with all required (helper) classes
at.tuwien.ifs.commons.gui.util - package at.tuwien.ifs.commons.gui.util
 
at.tuwien.ifs.commons.models - package at.tuwien.ifs.commons.models
 
at.tuwien.ifs.commons.util - package at.tuwien.ifs.commons.util
 
at.tuwien.ifs.commons.util.io - package at.tuwien.ifs.commons.util.io
 
at.tuwien.ifs.commons.util.jsap - package at.tuwien.ifs.commons.util.jsap
 
at.tuwien.ifs.feature.evaluation - package at.tuwien.ifs.feature.evaluation
 
at.tuwien.ifs.somtoolbox - package at.tuwien.ifs.somtoolbox
 
at.tuwien.ifs.somtoolbox.apps - package at.tuwien.ifs.somtoolbox.apps
Classes in this package implement applications based upon SOMs, the most important being the SOMViewer.
at.tuwien.ifs.somtoolbox.apps.analysis - package at.tuwien.ifs.somtoolbox.apps.analysis
 
at.tuwien.ifs.somtoolbox.apps.config - package at.tuwien.ifs.somtoolbox.apps.config
 
at.tuwien.ifs.somtoolbox.apps.helper - package at.tuwien.ifs.somtoolbox.apps.helper
 
at.tuwien.ifs.somtoolbox.apps.initEval - package at.tuwien.ifs.somtoolbox.apps.initEval
 
at.tuwien.ifs.somtoolbox.apps.metricEval - package at.tuwien.ifs.somtoolbox.apps.metricEval
 
at.tuwien.ifs.somtoolbox.apps.server - package at.tuwien.ifs.somtoolbox.apps.server
Server side application of the SOM - provides servlets for a web-client access.
at.tuwien.ifs.somtoolbox.apps.trainer - package at.tuwien.ifs.somtoolbox.apps.trainer
 
at.tuwien.ifs.somtoolbox.apps.viewer - package at.tuwien.ifs.somtoolbox.apps.viewer
This package implements the SOMViewer application; main class is SOMViewer.java.
at.tuwien.ifs.somtoolbox.apps.viewer.controls - package at.tuwien.ifs.somtoolbox.apps.viewer.controls
This package provides control elements, mostly dialogs, for the SOMViewer application.
at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback - package at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback
 
at.tuwien.ifs.somtoolbox.apps.viewer.controls.player - package at.tuwien.ifs.somtoolbox.apps.viewer.controls.player
 
at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver - package at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver
 
at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.httphandler - package at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.httphandler
 
at.tuwien.ifs.somtoolbox.apps.viewer.fileutils - package at.tuwien.ifs.somtoolbox.apps.viewer.fileutils
 
at.tuwien.ifs.somtoolbox.apps.viewer.handlers - package at.tuwien.ifs.somtoolbox.apps.viewer.handlers
This package provides event handlers for the SOMViewer application.
at.tuwien.ifs.somtoolbox.audio - package at.tuwien.ifs.somtoolbox.audio
 
at.tuwien.ifs.somtoolbox.clustering - package at.tuwien.ifs.somtoolbox.clustering
 
at.tuwien.ifs.somtoolbox.clustering.functions - package at.tuwien.ifs.somtoolbox.clustering.functions
 
at.tuwien.ifs.somtoolbox.data - package at.tuwien.ifs.somtoolbox.data
Classes in this package implement reading, storing and providing of different data needed for the SOM, e.g.
at.tuwien.ifs.somtoolbox.data.distance - package at.tuwien.ifs.somtoolbox.data.distance
 
at.tuwien.ifs.somtoolbox.data.metadata - package at.tuwien.ifs.somtoolbox.data.metadata
 
at.tuwien.ifs.somtoolbox.data.normalisation - package at.tuwien.ifs.somtoolbox.data.normalisation
 
at.tuwien.ifs.somtoolbox.database - package at.tuwien.ifs.somtoolbox.database
Classes providing the connection to and reading from or writing to a database.
at.tuwien.ifs.somtoolbox.doc - package at.tuwien.ifs.somtoolbox.doc
 
at.tuwien.ifs.somtoolbox.input - package at.tuwien.ifs.somtoolbox.input
Provides classes responsible for reading trained network models from file or some other location.
at.tuwien.ifs.somtoolbox.layers - package at.tuwien.ifs.somtoolbox.layers
Provides the basic classes constituting SOM-based neural networks.
at.tuwien.ifs.somtoolbox.layers.initialisation - package at.tuwien.ifs.somtoolbox.layers.initialisation
 
at.tuwien.ifs.somtoolbox.layers.metrics - package at.tuwien.ifs.somtoolbox.layers.metrics
This package contains the metrics used for distance calculation during training and for mapping data onto maps.
at.tuwien.ifs.somtoolbox.layers.quality - package at.tuwien.ifs.somtoolbox.layers.quality
Classes in this package implement various quality measures, indicating the quality of the SOM mapping.
at.tuwien.ifs.somtoolbox.models - package at.tuwien.ifs.somtoolbox.models
Provides the actual implementations of network models.
at.tuwien.ifs.somtoolbox.output - package at.tuwien.ifs.somtoolbox.output
Provides classes to write trained SOMs to files for future re-use.
at.tuwien.ifs.somtoolbox.output.labeling - package at.tuwien.ifs.somtoolbox.output.labeling
Provides implementations of labeling algorithms to assign semantic labels to SOM units.
at.tuwien.ifs.somtoolbox.properties - package at.tuwien.ifs.somtoolbox.properties
Provides classes that handle reading network-specific properties for the training and properties specific to the state of applications.
at.tuwien.ifs.somtoolbox.reportgenerator - package at.tuwien.ifs.somtoolbox.reportgenerator
 
at.tuwien.ifs.somtoolbox.reportgenerator.gui - package at.tuwien.ifs.somtoolbox.reportgenerator.gui
 
at.tuwien.ifs.somtoolbox.reportgenerator.output - package at.tuwien.ifs.somtoolbox.reportgenerator.output
 
at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers - package at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers
 
at.tuwien.ifs.somtoolbox.structures - package at.tuwien.ifs.somtoolbox.structures
 
at.tuwien.ifs.somtoolbox.summarisation - package at.tuwien.ifs.somtoolbox.summarisation
 
at.tuwien.ifs.somtoolbox.summarisation.gui - package at.tuwien.ifs.somtoolbox.summarisation.gui
 
at.tuwien.ifs.somtoolbox.summarisation.methods - package at.tuwien.ifs.somtoolbox.summarisation.methods
 
at.tuwien.ifs.somtoolbox.summarisation.output - package at.tuwien.ifs.somtoolbox.summarisation.output
 
at.tuwien.ifs.somtoolbox.summarisation.parser - package at.tuwien.ifs.somtoolbox.summarisation.parser
 
at.tuwien.ifs.somtoolbox.util - package at.tuwien.ifs.somtoolbox.util
Provides various helper classes.
at.tuwien.ifs.somtoolbox.util.comparables - package at.tuwien.ifs.somtoolbox.util.comparables
 
at.tuwien.ifs.somtoolbox.util.growingCellStructures - package at.tuwien.ifs.somtoolbox.util.growingCellStructures
 
at.tuwien.ifs.somtoolbox.util.inputVerifier - package at.tuwien.ifs.somtoolbox.util.inputVerifier
 
at.tuwien.ifs.somtoolbox.util.mnemonic - package at.tuwien.ifs.somtoolbox.util.mnemonic
Provides helpers to generate MnemonicSOM, SOMs of irregular shapes.
at.tuwien.ifs.somtoolbox.visualization - package at.tuwien.ifs.somtoolbox.visualization
Provides classes creating visualisations of trained SOMs.
at.tuwien.ifs.somtoolbox.visualization.clustering - package at.tuwien.ifs.somtoolbox.visualization.clustering
Contains classes implementing clustering methods on the SOM.
at.tuwien.ifs.somtoolbox.visualization.comparison - package at.tuwien.ifs.somtoolbox.visualization.comparison
 
at.tuwien.ifs.somtoolbox.visualization.contourplot - package at.tuwien.ifs.somtoolbox.visualization.contourplot
 
at.tuwien.ifs.somtoolbox.visualization.metromap - package at.tuwien.ifs.somtoolbox.visualization.metromap
Contains helper classes used by the MetroMapVisualizer.
at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree - package at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree
 
at.tuwien.ifs.somtoolbox.visualization.thematicmap - package at.tuwien.ifs.somtoolbox.visualization.thematicmap
Contains helper classes used by the ThematicClassMapVisualizer.
AttendeeMapper - Class in at.tuwien.ifs.somtoolbox.output
 
AttendeeMapper() - Constructor for class at.tuwien.ifs.somtoolbox.output.AttendeeMapper
 
attractScale - Variable in class at.tuwien.ifs.somtoolbox.layers.GrowingCellLayer
Scaling Factor for gravity between Units
ATTRIBUTE - Static variable in class at.tuwien.ifs.somtoolbox.data.ARFFFormatInputData
 
attributeTypes - Static variable in class at.tuwien.ifs.somtoolbox.visualization.RhythmPatternsAttributeVisualizer
 
audioFile - Variable in class at.tuwien.ifs.somtoolbox.data.metadata.AudioVectorMetaData
 
audioInputStream - Variable in class at.tuwien.ifs.somtoolbox.audio.PlaybackThread
 
AudioPlayer - Class in at.tuwien.ifs.somtoolbox.apps.viewer.controls.player
 
AudioPlayer() - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.AudioPlayer
 
audioPlayer - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.MIMETypes
 
AudioPlayThread - Class in at.tuwien.ifs.somtoolbox.apps.viewer.controls.player
 
AudioPlayThread(AudioVectorMetaData, PlayerListener) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.AudioPlayThread
 
AudioVectorMetaData - Class in at.tuwien.ifs.somtoolbox.data.metadata
 
AudioVectorMetaData(File, String) - Constructor for class at.tuwien.ifs.somtoolbox.data.metadata.AudioVectorMetaData
 
authenticated - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector.ConnectorEndpoint.Worker
 
autoCrop(BufferedImage) - Static method in class at.tuwien.ifs.somtoolbox.util.ImageUtils
Automatically crops an image, by continously removing full rows or columns from all sides, as long as all the pixels in them are all white
autoOrientation - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PaletteDisplayer
 
AutoRoutePanel - Class in at.tuwien.ifs.somtoolbox.apps.viewer.controls
 
AutoRoutePanel(String, CommonSOMViewerStateData) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AutoRoutePanel
 
AutoRoutePanel.SimpleTSPSolver - Class in at.tuwien.ifs.somtoolbox.apps.viewer.controls
 
AutoRoutePanel.SimpleTSPSolver(List<GeneralUnitPNode>) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AutoRoutePanel.SimpleTSPSolver
 
AutoRoutePanel.SimpleTSPSolver(List<GeneralUnitPNode>, boolean, Random) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AutoRoutePanel.SimpleTSPSolver
 
AutoRoutePanel.SimpleTSPSolver.Graph - Class in at.tuwien.ifs.somtoolbox.apps.viewer.controls
contains a Matrix of distances for a graph.
AutoRoutePanel.SimpleTSPSolver.Graph(int) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AutoRoutePanel.SimpleTSPSolver.Graph
 
AutoRoutePanel.SimpleTSPSolver.Tour - Class in at.tuwien.ifs.somtoolbox.apps.viewer.controls
A path in a graph.
AutoRoutePanel.SimpleTSPSolver.Tour(AutoRoutePanel.SimpleTSPSolver.Graph) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AutoRoutePanel.SimpleTSPSolver.Tour
 
AVAILABLE_VIS - Static variable in class at.tuwien.ifs.somtoolbox.input.SOMLibMapDescription
 
availableVis - Static variable in class at.tuwien.ifs.somtoolbox.apps.server.ServerSOM
 
avatar_info - Variable in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
avatar_key - Variable in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
avatar_name - Variable in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
avatarKeys - Variable in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
avatarNames - Variable in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
avatarPositions - Variable in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
average8Error - Variable in class at.tuwien.ifs.somtoolbox.layers.quality.TopographicError
 
averageError - Variable in class at.tuwien.ifs.somtoolbox.layers.quality.TopographicError
 
averageSSE(double[][]) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.Cluster
SSE again, this time the average one (i.e.
avMusic - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.TPlaybackThreadDataRecord
Lists of songs to play
aWaitForDecoder - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.PlaybackThread
Flag: if true, then the respective channel is waiting for a DecoderThread to finish.
ax - Variable in class at.tuwien.ifs.somtoolbox.visualization.FlowBorderlineVisualizer
 
ay - Variable in class at.tuwien.ifs.somtoolbox.visualization.FlowBorderlineVisualizer
 

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