at.tuwien.ifs.somtoolbox.output
Class HTMLOutputter
java.lang.Object
at.tuwien.ifs.somtoolbox.output.HTMLOutputter
- All Implemented Interfaces:
- SOMToolboxApp
public class HTMLOutputter
- extends Object
- implements SOMToolboxApp
- Version:
- $Id: HTMLOutputter.java 3830 2010-10-06 16:29:11Z mayer $
- Author:
- Michael Dittenbach, Christoph Becker, Rudolf Mayer
Method Summary |
private void |
_write(GrowingSOM gsom,
String fDir,
String fName,
String[] dataNames)
|
private double[] |
calcMinMax(GrowingSOM gsom)
|
private String |
createHTML(GrowingSOM gsom,
String fDir,
String fName,
double[] minmax,
String[] dataNames)
Creates the string containing the HTML representation of a map. |
private String |
createMiniMap(String fName,
Unit u)
|
private String |
createTooltipDataTable(String[] names,
double[] distances,
double minDistance,
double maxDistance,
String[] hlDataNames)
|
private String |
emptyUnitRepresentation(Unit u)
|
private String |
expandedUnitRepresentation(Unit u,
double[] minmax,
String fDir,
String fName,
String[] hlDataNames)
|
String |
getLinksuffix()
|
private String |
labelInfo(Unit u,
double[] minmax)
|
private String |
leafUnitRepresentation(Unit u,
double[] minmax,
String[] hlDataNames)
|
static void |
main(String[] args)
Main method for standalone operation. |
private String |
mapQuantizationInfo(GrowingSOM gsom)
|
private String |
mapRepresentation(GrowingSOM gsom,
double[] minmax,
String fDir,
String fName,
String[] dataNames)
|
private String |
nonEmptyUnitRepresentation(Unit u,
double[] minmax,
String fDir,
String fName,
String[] hlDataNames)
|
void |
setLinksuffix(String linksuffix)
|
private String |
unitRepresentation(Unit u,
double[] minmax,
String fDir,
String fName,
String[] dataNames)
|
private String |
upperLayerMapInfo(String name,
Unit su)
|
void |
write(GHSOM ghsom,
String fDir,
String fName)
|
void |
write(GHSOM ghsom,
String fDir,
String fName,
String[] dataNames)
Writes the HTML representation of a GHSOM to a file. |
void |
write(GrowingSOM gsom,
String fDir,
String fName)
|
void |
write(GrowingSOM gsom,
String fDir,
String fName,
String[] dataNames)
Writes the HTML representation of a GrowingSOM to a file. |
private static void |
writeStyleFile(String fDir)
|
private static void |
writeTooltipFile(String fDir)
|
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
OPTIONS
public static final com.martiansoftware.jsap.Parameter[] OPTIONS
DESCRIPTION
public static String DESCRIPTION
LONG_DESCRIPTION
public static String LONG_DESCRIPTION
APPLICATION_TYPE
public static final SOMToolboxApp.Type APPLICATION_TYPE
styleFileName
private static final String styleFileName
- See Also:
- Constant Field Values
tooltipFileName
private static final String tooltipFileName
- See Also:
- Constant Field Values
_xmlHeader
private static final String _xmlHeader
- See Also:
- Constant Field Values
_docType
private static final String _docType
- See Also:
- Constant Field Values
_htmlTag
private static final String _htmlTag
- See Also:
- Constant Field Values
_headTag
private static final String _headTag
- See Also:
- Constant Field Values
_linkToStyle
private static final String _linkToStyle
- See Also:
- Constant Field Values
_titleTag
private static final String _titleTag
- See Also:
- Constant Field Values
_titleTagClose
private static final String _titleTagClose
- See Also:
- Constant Field Values
_headTagClose
private static final String _headTagClose
- See Also:
- Constant Field Values
_bodyTag
private static final String _bodyTag
- See Also:
- Constant Field Values
_scriptTag
private static final String _scriptTag
- See Also:
- Constant Field Values
_bodyTagClose
private static final String _bodyTagClose
- See Also:
- Constant Field Values
_htmlTagClose
private static final String _htmlTagClose
- See Also:
- Constant Field Values
linksuffix
private String linksuffix
- suffix to append to hrefs. This allows the labelling of hrefs to omit the filesuffix, looks much better. defaults
to empty string for backwards compatibility
HTMLOutputter
public HTMLOutputter()
getLinksuffix
public String getLinksuffix()
- Returns:
- the linksuffix currently used
- See Also:
linksuffix
setLinksuffix
public void setLinksuffix(String linksuffix)
- Parameters:
linksuffix
- the new suffix to use- See Also:
linksuffix
main
public static void main(String[] args)
- Main method for standalone operation. Three possible uses:
- generate HTML representation directly from unit description file
- label the already mapped data and generate HTML
- map data onto a trained SOM, label the data and generate HTML output.
b. and c. are convenience functions.
Options are:
- -m metricName, opt., default = L2Metric
- -n normalization method, opt., default = NONE
- -v input vector filename, opt.
- -l labeler, opt., default = null
- -n number of labels, opt., default = 5
- -t template vector filename, opt.
- -u unit description file, opt. (makes sense if no labeling is given and an already labeled map should be
written)
- -w weight vector filename, opt.
- -d dense input vector matrix, switch
- html filename, mand.
- Parameters:
args
- the execution arguments as stated above.
write
public void write(GHSOM ghsom,
String fDir,
String fName,
String[] dataNames)
throws IOException
- Writes the HTML representation of a GHSOM to a file.
- Parameters:
ghsom
- The GHSOM to be written.fDir
- Directory where to write the file to.fName
- Filename without suffix. Usually the name of the training run.
- Throws:
IOException
write
public void write(GHSOM ghsom,
String fDir,
String fName)
throws IOException
- Throws:
IOException
write
public void write(GrowingSOM gsom,
String fDir,
String fName,
String[] dataNames)
throws IOException
- Writes the HTML representation of a GrowingSOM to a file.
- Parameters:
gsom
- The growing SOM to be written.fDir
- Directory where to write the file to.fName
- Filename without suffix. Usually the name of the training run.
- Throws:
IOException
write
public void write(GrowingSOM gsom,
String fDir,
String fName)
throws IOException
- Throws:
IOException
_write
private void _write(GrowingSOM gsom,
String fDir,
String fName,
String[] dataNames)
throws IOException
- Throws:
IOException
createHTML
private String createHTML(GrowingSOM gsom,
String fDir,
String fName,
double[] minmax,
String[] dataNames)
throws IOException
- Creates the string containing the HTML representation of a map.
- Parameters:
gsom
- The GrowingSOM to be written.fDir
- Directory where to write the file.fName
- Filename without suffix. Usually the name of the training run.minmax
- Array of double containing the minima and maxima of distances between data items and weight
vectors, and label values respectively. These values are used for coloring. [0] minimum distance, [1]
maximum distance, [2] minimum label value, [3] maximum label value.dataNames
- Array of strings containing data items to highlight on the map
- Returns:
- String containing the HTML representation.
- Throws:
IOException
upperLayerMapInfo
private String upperLayerMapInfo(String name,
Unit su)
mapQuantizationInfo
private String mapQuantizationInfo(GrowingSOM gsom)
mapRepresentation
private String mapRepresentation(GrowingSOM gsom,
double[] minmax,
String fDir,
String fName,
String[] dataNames)
throws IOException
- Throws:
IOException
unitRepresentation
private String unitRepresentation(Unit u,
double[] minmax,
String fDir,
String fName,
String[] dataNames)
throws IOException
- Throws:
IOException
emptyUnitRepresentation
private String emptyUnitRepresentation(Unit u)
nonEmptyUnitRepresentation
private String nonEmptyUnitRepresentation(Unit u,
double[] minmax,
String fDir,
String fName,
String[] hlDataNames)
throws IOException
- Throws:
IOException
expandedUnitRepresentation
private String expandedUnitRepresentation(Unit u,
double[] minmax,
String fDir,
String fName,
String[] hlDataNames)
throws IOException
- Throws:
IOException
leafUnitRepresentation
private String leafUnitRepresentation(Unit u,
double[] minmax,
String[] hlDataNames)
labelInfo
private String labelInfo(Unit u,
double[] minmax)
createTooltipDataTable
private String createTooltipDataTable(String[] names,
double[] distances,
double minDistance,
double maxDistance,
String[] hlDataNames)
createMiniMap
private String createMiniMap(String fName,
Unit u)
calcMinMax
private double[] calcMinMax(GrowingSOM gsom)
writeTooltipFile
private static void writeTooltipFile(String fDir)
writeStyleFile
private static void writeStyleFile(String fDir)