Uses of Class
at.tuwien.ifs.somtoolbox.models.GrowingSOM

Packages that use GrowingSOM
at.tuwien.ifs.somtoolbox.apps Classes in this package implement applications based upon SOMs, the most important being the SOMViewer
at.tuwien.ifs.somtoolbox.apps.analysis   
at.tuwien.ifs.somtoolbox.apps.helper   
at.tuwien.ifs.somtoolbox.apps.server Server side application of the SOM - provides servlets for a web-client access. 
at.tuwien.ifs.somtoolbox.apps.viewer This package implements the SOMViewer application; main class is SOMViewer.java. 
at.tuwien.ifs.somtoolbox.apps.viewer.controls This package provides control elements, mostly dialogs, for the SOMViewer application. 
at.tuwien.ifs.somtoolbox.apps.viewer.fileutils   
at.tuwien.ifs.somtoolbox.layers Provides the basic classes constituting SOM-based neural networks. 
at.tuwien.ifs.somtoolbox.models Provides the actual implementations of network models. 
at.tuwien.ifs.somtoolbox.output Provides classes to write trained SOMs to files for future re-use. 
at.tuwien.ifs.somtoolbox.output.labeling Provides implementations of labeling algorithms to assign semantic labels to SOM units. 
at.tuwien.ifs.somtoolbox.reportgenerator   
at.tuwien.ifs.somtoolbox.util Provides various helper classes. 
at.tuwien.ifs.somtoolbox.visualization Provides classes creating visualisations of trained SOMs. 
at.tuwien.ifs.somtoolbox.visualization.comparison   
at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree   
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.apps
 

Fields in at.tuwien.ifs.somtoolbox.apps declared as GrowingSOM
private  GrowingSOM SDHTrainingSequenceGenerator.gsom
           
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.apps.analysis
 

Fields in at.tuwien.ifs.somtoolbox.apps.analysis declared as GrowingSOM
private  GrowingSOM PlaylistAnalysis.som
           
 

Methods in at.tuwien.ifs.somtoolbox.apps.analysis that return GrowingSOM
 GrowingSOM PlaylistAnalysis.getSom()
           
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.apps.helper
 

Methods in at.tuwien.ifs.somtoolbox.apps.helper with parameters of type GrowingSOM
private  void DataMapper.mapCompleteDataAfterTraining(GrowingSOM som, InputData data, SOMLibClassInformation classInfo, ArrayList<String> mappingExceptions, String labelerName, int numLabels)
           
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.apps.server
 

Fields in at.tuwien.ifs.somtoolbox.apps.server declared as GrowingSOM
 GrowingSOM ServerSOM.growingSOM
           
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.apps.viewer
 

Fields in at.tuwien.ifs.somtoolbox.apps.viewer declared as GrowingSOM
 GrowingSOM CommonSOMViewerStateData.growingSOM
           
private  GrowingSOM MapPNode.gsom
           
private  GrowingSOM ComponentPlaneClusteringFrame.orginalSom
           
private  GrowingSOM ComponentPlaneClusteringFrame.ComponentPlaneClustering.som
           
 

Methods in at.tuwien.ifs.somtoolbox.apps.viewer that return GrowingSOM
 GrowingSOM MapPNode.getGsom()
           
 

Methods in at.tuwien.ifs.somtoolbox.apps.viewer with parameters of type GrowingSOM
 edu.umd.cs.piccolo.PNode ComponentPlaneClusteringFrame.makeComponentPNode(ComponentPlanesVisualizer visualizer, GrowingSOM cpsom)
           
private  void ComponentPlaneClusteringFrame.reStructureMap(GrowingSOM cpsom)
           
 

Constructors in at.tuwien.ifs.somtoolbox.apps.viewer with parameters of type GrowingSOM
ComponentPlaneClusteringFrame.ComponentPlaneClustering(GrowingSOM som, edu.umd.cs.piccolo.PNode vis)
           
ComponentPlaneClusteringFrame(SOMViewer somViewer, GrowingSOM orginalSom, SOMLibTemplateVector tv)
           
MapPNode(JFrame parentFrame, GrowingSOM gsom, GrowingLayer growingLayer, CommonSOMViewerStateData state)
          Constructor for a already loaded GrowingLayer - can be used for visualize sublayers of a ghsom!
SOMPane(JFrame parent, GrowingSOM gsom, GrowingLayer layer, CommonSOMViewerStateData state)
          constructor for an already loaded growing som.
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.apps.viewer.controls
 

Fields in at.tuwien.ifs.somtoolbox.apps.viewer.controls declared as GrowingSOM
protected  GrowingSOM MultichannelPlaybackPanel.gsom
           
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.apps.viewer.fileutils
 

Methods in at.tuwien.ifs.somtoolbox.apps.viewer.fileutils with parameters of type GrowingSOM
static BufferedImage ExportUtils.getVisualization(AbstractBackgroundImageVisualizer abiv, int currentVariant, GrowingSOM gsom, int unitWidth)
           
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.layers
 

Fields in at.tuwien.ifs.somtoolbox.layers declared as GrowingSOM
private  GrowingSOM Unit.mappedSOM
           
 

Methods in at.tuwien.ifs.somtoolbox.layers that return GrowingSOM
 GrowingSOM Unit.getMappedSOM()
          Returns the map assigned to this unit or null otherwise.
 

Methods in at.tuwien.ifs.somtoolbox.layers that return types with arguments of type GrowingSOM
 ArrayList<GrowingSOM> GrowingLayer.getAllSubMaps()
           
 

Methods in at.tuwien.ifs.somtoolbox.layers with parameters of type GrowingSOM
 void Unit.setMappedSOM(GrowingSOM mappedSOM)
          Assigns a map to this unit.
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.models
 

Subclasses of GrowingSOM in at.tuwien.ifs.somtoolbox.models
 class MnemonicSOM
          This class implements so-called Mnemonic SOMs, i.e.
 

Fields in at.tuwien.ifs.somtoolbox.models declared as GrowingSOM
private  GrowingSOM GHSOM.topLayerMap
           
 

Methods in at.tuwien.ifs.somtoolbox.models that return GrowingSOM
 GrowingSOM GHSOM.topLayerMap()
          Returns the top-layer map
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.output
 

Methods in at.tuwien.ifs.somtoolbox.output with parameters of type GrowingSOM
private  void HTMLOutputter._write(GrowingSOM gsom, String fDir, String fName, String[] dataNames)
           
private  double[] HTMLOutputter.calcMinMax(GrowingSOM gsom)
           
private static void TrajectoryOutputter.createGraphics(Graphics2D g, int imageWidth, int imageHeight, GrowingSOM gsom, String[] dataNames, boolean drawLines)
           
private  String HTMLOutputter.createHTML(GrowingSOM gsom, String fDir, String fName, double[] minmax, String[] dataNames)
          Creates the string containing the HTML representation of a map.
private static int[][] TrajectoryOutputter.getNrDataNames(GrowingSOM gsom, String[] dataNames)
           
private  String HTMLOutputter.mapQuantizationInfo(GrowingSOM gsom)
           
private  String HTMLOutputter.mapRepresentation(GrowingSOM gsom, double[] minmax, String fDir, String fName, String[] dataNames)
           
static void ESOMMapOutputter.write(GrowingSOM gsom, InputData data, String dir, String fileName, boolean gzipped)
           
 void HTMLOutputter.write(GrowingSOM gsom, String fDir, String fName)
           
static void SOMLibMapOutputter.write(GrowingSOM gsom, String fDir, String fName, boolean gzipped, SOMProperties somProps, FileProperties fileProps)
          Writes a SOM (or SOM-like) structure to SOMLib format.
 void HTMLOutputter.write(GrowingSOM gsom, String fDir, String fName, String[] dataNames)
          Writes the HTML representation of a GrowingSOM to a file.
static void TrajectoryOutputter.write(GrowingSOM gsom, String fDir, String fName, String[] dataNames, boolean drawLines)
           
static void SOMPAKMapOutputter.write(GrowingSOM gsom, TemplateVector tv, String dir, String fileName, boolean gzipped)
           
static void SOMLibMapOutputter.writeDataWinnerMappingFile(GrowingSOM gsom, InputData data, int numWinners, String fDir, String fName, boolean gzipped)
           
static void SOMLibMapOutputter.writeMapDescriptionFile(GrowingSOM topLevelMap, String fDir, String fName, SOMProperties somProps, FileProperties fileProps)
           
static void SOMLibMapOutputter.writeUnitDescriptionFile(GrowingSOM gsom, String fDir, String fName, boolean gzipped)
          Writes the Unit Description File.
static void SOMLibMapOutputter.writeWeightVectorFile(GrowingSOM gsom, String fDir, String fName, boolean gzipped, String... extraHeaders)
          Writes the Weight Vector File.
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.output.labeling
 

Methods in at.tuwien.ifs.somtoolbox.output.labeling with parameters of type GrowingSOM
 void Labeler.label(GrowingSOM gsom, InputData data, int num)
          Determines and adds labels to the units of a GrowingSOM (should be NetworkModel in the future).
 void LagusKeywordLabeler.label(GrowingSOM gsom, InputData data, int num)
           
 void LabelSOM.label(GrowingSOM gsom, InputData data, int num)
           
 void Labeler.label(GrowingSOM gsom, InputData data, int num, boolean ignoreLabelsWithZero)
           
 void LagusKeywordLabeler.label(GrowingSOM gsom, InputData data, int num, boolean ignoreLabelsWithZero)
           
 void LabelSOM.label(GrowingSOM gsom, InputData data, int num, boolean ignoreLabelsWithZero)
           
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.reportgenerator
 

Fields in at.tuwien.ifs.somtoolbox.reportgenerator declared as GrowingSOM
private  GrowingSOM TestRunResult.som
           
 

Methods in at.tuwien.ifs.somtoolbox.reportgenerator that return GrowingSOM
 GrowingSOM TestRunResult.getGrowingSOM()
          returns the SOM learned within the run this object represents
 

Methods in at.tuwien.ifs.somtoolbox.reportgenerator with parameters of type GrowingSOM
private  int GHSOMTestRunResult.countSubmaps(GrowingSOM map, int count)
           
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.util
 

Methods in at.tuwien.ifs.somtoolbox.util with parameters of type GrowingSOM
static void VisualisationUtils.drawUnitGrid(BufferedImage bufferedImage, GrowingSOM gsom, int width, int height)
          Draws a black grid of units on the BufferedImage
static void VisualisationUtils.drawUnitGrid(Graphics2D g, GrowingSOM gsom, int width, int height)
          Draws a black grid of units on the Graphics2D object
static void VisualisationUtils.drawUnitGrid(Graphics2D g, GrowingSOM gsom, int width, int height, Color colour)
          Draws a grid of units on the Graphics2D object in the given colour.
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.visualization
 

Fields in at.tuwien.ifs.somtoolbox.visualization declared as GrowingSOM
private  GrowingSOM MetroMapVisualizer.gsom
           
private  GrowingSOM FlowBorderlineVisualizer.gsom
           
 

Methods in at.tuwien.ifs.somtoolbox.visualization with parameters of type GrowingSOM
 String AbstractBackgroundImageVisualizer.appendToCacheKey(GrowingSOM gsom, int currentVariant, int width, int height, Object... parts)
           
private  void ThematicClassMapVisualizer.applyColourWeighting(GrowingSOM gsom, int width, int height, BufferedImage res, Graphics2D g)
           
 void ComparisonVisualizer.calculateMeanVarDistance(GrowingSOM gsom, String[] prefixes, int index, boolean normalized)
           
protected  void SmoothedDataHistograms.ceckInitSmoothingCache(GrowingSOM gsom, boolean forceSmoothingCacheInitialisation)
           
protected  void SmoothedDataHistograms.checkNeededObjectsAvailable(GrowingSOM gsom)
           
protected  void AdaptiveCoordinatesVisualizer.checkNeededObjectsAvailable(GrowingSOM gsom)
           
protected  void AbstractBackgroundImageVisualizer.checkNeededObjectsAvailable(GrowingSOM gsom)
           
protected  cern.colt.matrix.DoubleMatrix2D AbstractMatrixVisualizer.computeHitHistogram(GrowingSOM gsom)
          Computes the hit-histogram from the given GrowingSOM.
protected  flanagan.interpolation.BiCubicSplineFast SmoothedDataHistograms.computeSpline(GrowingSOM gsom, cern.colt.matrix.DoubleMatrix2D matrix, int width, int height, int unitWidth, int unitHeight)
           
protected  flanagan.interpolation.BiCubicSplineFast AbstractMatrixVisualizer.computeSpline(GrowingSOM gsom, cern.colt.matrix.DoubleMatrix2D matrix, int width, int height, int unitWidth, int unitHeight)
           
private  BufferedImage ComponentPlanesVisualizer.createComponentPlaneImage(GrowingSOM gsom, int width, int height)
           
private  BufferedImage MappingDistortionVisualizer.createDistortionImage(GrowingSOM gsom, int width, int height)
           
private  BufferedImage MappingDistortionVisualizer.createDistortionImage2(GrowingSOM gsom, int width, int height)
           
private  BufferedImage GapVisualiser.createGapMatrix(GrowingSOM gsom, int width, int height)
           
protected  BufferedImage AbstractMatrixVisualizer.createImage(GrowingSOM gsom, cern.colt.matrix.DoubleMatrix2D matrix, int width, int height, boolean interpolate)
          Creates an image from a matrix of heights.
private  BufferedImage TopographicProductVisualizer.createImage(GrowingSOM gsom, int width, int height, double[][] unitquals)
           
private  ArrayList<UnitPair> NeighbourhoodGraph.createKNNBased(GrowingSOM gsom, int width, int height)
          Returns a list of unit-pairs, for which at least one of the two units is one of the k-nearest neighbours of the other one.
protected  BufferedImage MetroMapVisualizer.createMetromapImage(int index, GrowingSOM gsom, int width, int height)
          Will create the metro map image for the given params.
 BufferedImage MetroMapVisualizer.createMetromapImage(int index, GrowingSOM gsom, int width, int height, int component)
           
private  BufferedImage QuantizationErrorVisualizer.createMQEImage(GrowingSOM gsom, int width, int height)
           
private  BufferedImage TopographicErrorVisualizer.createMQEImage(GrowingSOM gsom, int width, int height, String cachefile)
           
private  BufferedImage UMatrix.createOriginalDMatrix(GrowingSOM gsom, int width, int height)
          Creates an image of the D-Matrix visualisation.
private  BufferedImage UMatrix.createOriginalUMatrix(GrowingSOM gsom, int width, int height)
          Creates an image of the U-Matrix visualisation.
 cern.colt.matrix.DoubleMatrix2D PMatrix.createPMatrix(GrowingSOM gsom)
           
private  BufferedImage SilhouetteVisualizer.createPSVImage(GrowingSOM gsom, int width, int height)
           
private  BufferedImage QuantizationErrorVisualizer.createQEImage(GrowingSOM gsom, int width, int height)
           
private  BufferedImage TopographicErrorVisualizer.createQEImage(GrowingSOM gsom, int width, int height, String cachefile)
           
private  BufferedImage IntrinsicDistanceVisualizer.createQEImage(GrowingSOM gsom, int width, int height, String cachefile)
           
private  ArrayList<UnitPair> NeighbourhoodGraph.createRadiusBased(GrowingSOM gsom, int width, int height)
          Returns a list of unit-pairs, for which the distance of at least one of them to the other one is smaller than the fixed radius.
private  BufferedImage SilhouetteVisualizer.createSSVImage(GrowingSOM gsom, int width, int height)
           
private  BufferedImage SilhouetteVisualizer.createSVImage(GrowingSOM gsom, int width, int height)
           
 BufferedImage TopographicProductVisualizer.createTPImage(GrowingSOM gsom, int width, int height, int k)
          Generates a visualisation with a fixed k
private  BufferedImage TopographicProductVisualizer.createTPImage(GrowingSOM gsom, int width, int height, String cachefile)
           
private  BufferedImage TrustwothinessVisualizer.createTWImage(GrowingSOM gsom, int width, int height, double[][] unitquals)
           
 BufferedImage TrustwothinessVisualizer.createTWImage(GrowingSOM gsom, int width, int height, int k)
          /** Generates a visualisation with a fixed k
private  BufferedImage TrustwothinessVisualizer.createTWImage(GrowingSOM gsom, int width, int height, String cachefile)
           
 cern.colt.matrix.DoubleMatrix2D UMatrix.createUMatrix(GrowingSOM gsom)
          Creates the height matrix.
 cern.colt.matrix.DoubleMatrix2D PMatrix.createUStarMatrix(GrowingSOM gsom)
           
 BufferedImage RegressionVisualiser.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage TopographicErrorVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage SmoothedDataHistograms.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage MappingDistortionVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage SilhouetteVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage TrustwothinessVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage AdaptiveCoordinatesVisualizer.createVisualization(int variantIndex, GrowingSOM gsom, int width, int height)
           
 BufferedImage MetroMapVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage SearchResultHistogramVisualizer.createVisualization(int variantIndex, GrowingSOM gsom, int width, int height)
           
 BufferedImage HitHistogramVisualizer.createVisualization(int variantIndex, GrowingSOM gsom, int width, int height)
           
 BufferedImage EntropyVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage QuantizationErrorVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage ThematicClassMapVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage TopographicProductVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
abstract  BufferedImage AbstractBackgroundImageVisualizer.createVisualization(int variantIndex, GrowingSOM gsom, int width, int height)
          Creates a visualisation image.
 BufferedImage RhythmPatternsAttributeVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage SmoothedCountHistograms.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage IntrinsicDistanceVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage GapVisualiser.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage NeighbourhoodGraph.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage ComponentPlanesVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage ComparisonVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage PMatrix.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage FuzzyColourCodingVisualiser.createVisualization(int variantIndex, GrowingSOM gsom, int width, int height)
           
 BufferedImage UMatrix.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage ClusterConnectionsVisualizer.createVisualization(int variantIndex, GrowingSOM gsom, int width, int height)
           
 BufferedImage ActivityHistogram.createVisualization(int index, GrowingSOM gsom, int width, int height)
          Draws the activity histogram.
 BufferedImage FlowBorderlineVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage MinimumSpanningTreeVisualizer.createVisualization(int variantIndex, GrowingSOM gsom, int width, int height)
           
 BufferedImage CategoryPieChartVisualizer.createVisualization(int variantIndex, GrowingSOM gsom, int width, int height)
           
 BufferedImage ThematicClassMapVisualizer.createVisualization(int index, GrowingSOM gsom, int width, int height, int ClassID)
           
 BufferedImage RegressionVisualiser.createVisualization(int index, GrowingSOM gsom, int width, int height, int blockWidth, int blockHeight, boolean forceSmoothingCacheInitialisation, boolean shallDrawBackground)
           
 BufferedImage SmoothedDataHistograms.createVisualization(int index, GrowingSOM gsom, int width, int height, int blockWidth, int blockHeight, boolean forceSmoothingCacheInitialisation, boolean shallDrawBackground)
           
 BufferedImage ComponentPlanesVisualizer.createVisualization(int index, int plane, GrowingSOM gsom, int width, int height)
           
 BufferedImage AbstractBackgroundImageVisualizer.createVisualization(String variantName, GrowingSOM gsom, int width, int height)
          Creates a visualisation for the given variant name.
private  String AbstractBackgroundImageVisualizer.getBasicCacheKey(GrowingSOM gsom, int currentVariant, int width, int height)
           
protected  String SmoothedDataHistograms.getCacheKey(GrowingSOM gsom, int index, int width, int height)
           
protected  String AdaptiveCoordinatesVisualizer.getCacheKey(GrowingSOM gsom, int index, int width, int height)
           
protected  String MetroMapVisualizer.getCacheKey(GrowingSOM gsom, int index, int width, int height)
           
protected  String AbstractMatrixVisualizer.getCacheKey(GrowingSOM gsom, int index, int width, int height)
           
protected  String ThematicClassMapVisualizer.getCacheKey(GrowingSOM gsom, int currentVariant, int width, int height)
           
protected  String AbstractBackgroundImageVisualizer.getCacheKey(GrowingSOM gsom, int currentVariant, int width, int height)
          The key of a cache is created as follows: VisualisationShortName + Hashcode of the SOM + Width + Height + Opacity.
Sub-classes might add more information to the cache, if needed.
protected  String RhythmPatternsAttributeVisualizer.getCacheKey(GrowingSOM gsom, int index, int width, int height)
           
protected  String NeighbourhoodGraph.getCacheKey(GrowingSOM gsom, int index, int width, int height)
           
protected  String ComponentPlanesVisualizer.getCacheKey(GrowingSOM gsom, int index, int width, int height)
           
protected  String PMatrix.getCacheKey(GrowingSOM gsom, int index, int width, int height)
           
protected  String FuzzyColourCodingVisualiser.getCacheKey(GrowingSOM gsom, int currentVariant, int width, int height)
           
protected  String ClusterConnectionsVisualizer.getCacheKey(GrowingSOM gsom, int currentVariant, int width, int height)
           
protected  String ActivityHistogram.getCacheKey(GrowingSOM gsom, int index, int width, int height)
           
protected  String FlowBorderlineVisualizer.getCacheKey(GrowingSOM gsom, int index, int width, int height)
           
protected  String MinimumSpanningTreeVisualizer.getCacheKey(GrowingSOM gsom, int index, int width, int height)
           
protected  String RhythmPatternsAttributeVisualizer.getCacheKey(GrowingSOM gsom, int index, int width, int height, String attributeType)
           
private  double[][] ThematicClassMapVisualizer.getUmValues(GrowingSOM gsom, cern.colt.matrix.DoubleMatrix2D matrix, int width, int height)
          Adapted from AbstractMatrixVisualizer.createImage(GrowingSOM, DoubleMatrix2D, int, int, boolean).
FIXME: check if the two methods can be merged.
 BufferedImage BackgroundImageVisualizer.getVisualization(int variantIndex, GrowingSOM gsom, int width, int height)
          Returns a visualisation image.
 BufferedImage MetroMapVisualizer.getVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage AbstractMatrixVisualizer.getVisualization(int index, GrowingSOM gsom, int width, int height)
          overriding the method in the superclass as we have a different cache key, and to set the min & max matrix values to -1
 BufferedImage SearchResultHistogramVisualizer.getVisualization(int index, GrowingSOM gsom, int width, int height)
           
 BufferedImage AbstractBackgroundImageVisualizer.getVisualization(int index, GrowingSOM gsom, int width, int height)
          Returns the requested visualization image, either by retrieving it from the image cache, or by invoking AbstractBackgroundImageVisualizer.createVisualization(int, GrowingSOM, int, int) to create the image new.
 BufferedImage SmoothedDataHistograms.getVisualization(int index, int smoothingFactor, GrowingSOM gsom, int width, int height)
          Visualisation for a specific smoothing factor
 HashMap<String,BufferedImage> NeighbourhoodGraph.getVisualizationFlavours_K(int index, GrowingSOM gsom, int width, int height)
           
 HashMap<String,BufferedImage> NeighbourhoodGraph.getVisualizationFlavours_R(int index, GrowingSOM gsom, int width, int height)
           
 HashMap<String,BufferedImage> SmoothedDataHistograms.getVisualizationFlavours(int variantIndex, GrowingSOM gsom, int width, int height)
           
 HashMap<String,BufferedImage> BackgroundImageVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height)
          Returns all visualisation flavours of the given variant, e.g.
 HashMap<String,BufferedImage> MetroMapVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height)
           
 HashMap<String,BufferedImage> ThematicClassMapVisualizer.getVisualizationFlavours(int variantIndex, GrowingSOM gsom, int width, int height)
           
 HashMap<String,BufferedImage> AbstractBackgroundImageVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height)
          Default implementation which returns a map of size 1 with the standard, unparameterised visualisation of the given variant.
 HashMap<String,BufferedImage> RhythmPatternsAttributeVisualizer.getVisualizationFlavours(int variantIndex, GrowingSOM gsom, int width, int height)
          Saves all flavours of RP attribute types (#attributeTypes).
 HashMap<String,BufferedImage> NeighbourhoodGraph.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height)
           
 HashMap<String,BufferedImage> ComponentPlanesVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height)
           
 HashMap<String,BufferedImage> ClusterConnectionsVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height)
           
 HashMap<String,BufferedImage> ActivityHistogram.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height)
           
 HashMap<String,BufferedImage> FlowBorderlineVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height)
           
 HashMap<String,BufferedImage> SmoothedDataHistograms.getVisualizationFlavours(int variantIndex, GrowingSOM gsom, int width, int height, int maxFlavours)
           
 HashMap<String,BufferedImage> BackgroundImageVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, int maxFlavours)
          Returns all visualisation flavours of the given variant just as BackgroundImageVisualizer.getVisualizationFlavours(int, GrowingSOM, int, int), but limiting the number of flavours to the given maximum number.
 HashMap<String,BufferedImage> MetroMapVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, int maxFlavours)
           
 HashMap<String,BufferedImage> ThematicClassMapVisualizer.getVisualizationFlavours(int variantIndex, GrowingSOM gsom, int width, int height, int maxFlavours)
           
 HashMap<String,BufferedImage> AbstractBackgroundImageVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, int maxFlavours)
          Default implementation equal to AbstractBackgroundImageVisualizer.getVisualizationFlavours(int, GrowingSOM, int, int).
 HashMap<String,BufferedImage> RhythmPatternsAttributeVisualizer.getVisualizationFlavours(int variantIndex, GrowingSOM gsom, int width, int height, int maxFlavours)
           
 HashMap<String,BufferedImage> NeighbourhoodGraph.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, int maxFlavours)
           
 HashMap<String,BufferedImage> ComponentPlanesVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, int maxFlavours)
           
 HashMap<String,BufferedImage> ClusterConnectionsVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, int maxFlavours)
           
 HashMap<String,BufferedImage> ActivityHistogram.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, int maxFlavours)
           
 HashMap<String,BufferedImage> FlowBorderlineVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, int maxFlavours)
           
 HashMap<String,BufferedImage> SmoothedDataHistograms.getVisualizationFlavours(int variantIndex, GrowingSOM gsom, int width, int height, Map<String,String> flavourParameters)
           
 HashMap<String,BufferedImage> BackgroundImageVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, Map<String,String> flavourParameters)
          Returns all visualisation flavours of the given variant just as BackgroundImageVisualizer.getVisualizationFlavours(int, GrowingSOM, int, int), but limiting the number of flavours by the given parameters.
 HashMap<String,BufferedImage> MetroMapVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, Map<String,String> flavourParameters)
           
 HashMap<String,BufferedImage> ThematicClassMapVisualizer.getVisualizationFlavours(int variantIndex, GrowingSOM gsom, int width, int height, Map<String,String> flavourParameters)
           
 HashMap<String,BufferedImage> AbstractBackgroundImageVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, Map<String,String> flavourParameters)
          Default implementation equal to AbstractBackgroundImageVisualizer.getVisualizationFlavours(int, GrowingSOM, int, int).
 HashMap<String,BufferedImage> RhythmPatternsAttributeVisualizer.getVisualizationFlavours(int variantIndex, GrowingSOM gsom, int width, int height, Map<String,String> flavourParameters)
           
 HashMap<String,BufferedImage> NeighbourhoodGraph.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, Map<String,String> flavourParameters)
           
 HashMap<String,BufferedImage> ComponentPlanesVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, Map<String,String> flavourParameters)
           
 HashMap<String,BufferedImage> ClusterConnectionsVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, Map<String,String> flavourParameters)
           
 HashMap<String,BufferedImage> ActivityHistogram.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, Map<String,String> flavourParameters)
           
 HashMap<String,BufferedImage> FlowBorderlineVisualizer.getVisualizationFlavours(int index, GrowingSOM gsom, int width, int height, Map<String,String> flavourParameters)
           
 void MetroMapVisualizer.initNeighbourhoodLookup(GrowingSOM gsom)
           
protected  void SmoothedDataHistograms.initSmoothingCache(GrowingSOM gsom)
           
private  void RhythmPatternsAttributeVisualizer.initVisualizationMatrices(GrowingSOM gsom, int width, int height)
           
private  double[][] TrustwothinessVisualizer.readFromCacheFile(GrowingSOM gsom, String cachefile)
           
private  double[][] TopographicProductVisualizer.readFromCacheFile(GrowingSOM gsom, String cachefile)
           
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.visualization.comparison
 

Fields in at.tuwien.ifs.somtoolbox.visualization.comparison declared as GrowingSOM
private  GrowingSOM SOMComparison.gsom1
           
private  GrowingSOM SOMComparison.gsom2
           
 

Methods in at.tuwien.ifs.somtoolbox.visualization.comparison that return GrowingSOM
static GrowingSOM SOMComparison.loadGSOM(String setname)
           
 

Methods in at.tuwien.ifs.somtoolbox.visualization.comparison with parameters of type GrowingSOM
static int[][] SOMComparison.calculateClusterAssignment(GrowingSOM gsom, int level)
          Assigns each unit in the grid a number for the cluster it belongs to
private  LabelCoordinates SOMComparison.getClusterMeanPoint(int[][] assignment, int y, int x, GrowingSOM gsom)
          Try to find a mean-point for a cluster
static LabelCoordinates[] SOMComparison.getLabelCoordinates(GrowingSOM gsom)
           
 void SOMComparison.loadGSOMs(GrowingSOM gsom, String prefix)
           
 

Uses of GrowingSOM in at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree
 

Fields in at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree declared as GrowingSOM
protected  GrowingSOM Graph.gsom
           
 

Constructors in at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree with parameters of type GrowingSOM
Graph(GrowingSOM gsom)
           
InputdataGraph(GrowingSOM gsom)
           
SomGraph(GrowingSOM gsom, boolean skipInterpolationUnits, SomGraph.NeighbourhoodMode neighbourhoodMode)